RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 SCAND2PQ9GZW5 306 aaPredicted RBP24.62■■□□□ 1.53
PPP1R3F-203ENST00000466508 USP17L3A6NCW0 530 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 USP17L4A6NCW7 530 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 SCNN1DP51172 638 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 USP17L1Q7RTZ2 530 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 CATIPQ7Z7H3 387 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 NUP133Q8WUM0 1156 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 MKNK2Q9HBH9 465 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 ZNF287Q9HBT7 754 aa24.61■■□□□ 1.53
PPP1R3F-203ENST00000466508 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 NMT2O60551 498 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 FMNL1O95466 1100 aaPredicted RBP24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 CALM1P0DP23 149 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 CALM2P0DP24 149 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 CALM3P0DP25 149 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 PSMD1Q99460 953 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 ALG1Q9BT22 464 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 MRIQ9BWK5 157 aa24.6■■□□□ 1.53
PPP1R3F-203ENST00000466508 DDAH1O94760 285 aa24.59■■□□□ 1.53
PPP1R3F-203ENST00000466508 TFAP4Q01664 338 aa24.59■■□□□ 1.53
PPP1R3F-203ENST00000466508 SSRP1Q08945 709 aaKnown RBP24.59■■□□□ 1.53
PPP1R3F-203ENST00000466508 C16orf86Q6ZW13 317 aa24.59■■□□□ 1.53
PPP1R3F-203ENST00000466508 TTC6Q86TZ1 520 aa24.59■■□□□ 1.53
PPP1R3F-203ENST00000466508 MYH8P13535 1937 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 WDHD1O75717 1129 aaPredicted RBP24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 CRKP46108 304 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 HDLBPQ00341 1268 aaKnown RBP24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 TROAPQ12815 778 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 APOBEC3HQ6NTF7 200 aaKnown RBP24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 KIAA0825Q8IV33 1275 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 SLC44A5Q8NCS7 719 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 ZDHHC15Q96MV8 337 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 SLC26A6Q9BXS9 759 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 CD2APQ9Y5K6 639 aa24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 BRCA1P38398 1863 aaKnown RBP24.58■■□□□ 1.53
PPP1R3F-203ENST00000466508 ZSCAN23Q3MJ62 389 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 OTUD7BQ6GQQ9 843 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 TRIM22Q8IYM9 498 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 ZNF444Q8N0Y2 327 aaPredicted RBP24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 USP40Q9NVE5 1235 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 TMEM63CQ9P1W3 806 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 RBM27Q9P2N5 1060 aaKnown RBP24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 TFIP11Q9UBB9 837 aaKnown RBP24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 CFAP45Q9UL16 551 aa24.58■■□□□ 1.52
PPP1R3F-203ENST00000466508 FSD2A1L4K1 749 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 TGFB2P61812 414 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 ATL3Q6DD88 541 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 RCSD1Q6JBY9 416 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 NBPF11Q86T75 865 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 NLGN2Q8NFZ4 835 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 WASF1Q92558 559 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 AIFM3Q96NN9 605 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 GJB4Q9NTQ9 266 aa24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 ISY1Q9ULR0 285 aaKnown RBP24.57■■□□□ 1.52
PPP1R3F-203ENST00000466508 RASA1P20936 1047 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 CCDC178Q5BJE1 867 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 CDC42EP5Q6NZY7 148 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 DGKHQ86XP1 1220 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 CRACR2BQ8N4Y2 399 aaPredicted RBP24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 LEO1Q8WVC0 666 aaPredicted RBP24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 SPATA32Q96LK8 384 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 IL17RBQ9NRM6 502 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 TCP11L1Q9NUJ3 509 aa24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 RBM28Q9NW13 759 aaKnown RBP24.56■■□□□ 1.52
PPP1R3F-203ENST00000466508 TSPY3P0CV98 308 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 TSPY8P0CW00 308 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 CDK8P49336 464 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 PICALMQ13492 652 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 GOLGA6L3A6NEY3 463 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 YDJCA8MPS7 323 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 SOGA3Q5TF21 947 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 ANKS1AQ92625 1134 aa24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 SYAP1Q96A49 352 aaPredicted RBP24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 DDX4Q9NQI0 724 aaKnown RBP24.55■■□□□ 1.52
PPP1R3F-203ENST00000466508 ZNF445P59923 1031 aa24.54■■□□□ 1.52
PPP1R3F-203ENST00000466508 BRAPQ7Z569 592 aa24.54■■□□□ 1.52
PPP1R3F-203ENST00000466508 SERPINA10Q9UK55 444 aa24.54■■□□□ 1.52
PPP1R3F-203ENST00000466508 DEXIO95424 95 aa24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 KRT40Q6A162 431 aa24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 ZNF396Q96N95 335 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 RNF26Q9BY78 433 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 PIM2Q9P1W9 311 aa24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 KIF23Q02241 960 aaPredicted RBP24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 TRIM29Q14134 588 aa24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 CMTR1Q8N1G2 835 aaKnown RBP24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 VPS33BQ9H267 617 aa24.53■■□□□ 1.52
PPP1R3F-203ENST00000466508 UBE2Q2LH0YL09 131 aa24.52■■□□□ 1.52
PPP1R3F-203ENST00000466508 CCDC82Q8N4S0 544 aa24.52■■□□□ 1.52
PPP1R3F-203ENST00000466508 CTCFLQ8NI51 663 aaPredicted RBP24.52■■□□□ 1.52
PPP1R3F-203ENST00000466508 OSBPL5Q9H0X9 879 aaPredicted RBP24.52■■□□□ 1.52
PPP1R3F-203ENST00000466508 KAT14Q9H8E8 782 aa24.52■■□□□ 1.52
PPP1R3F-203ENST00000466508 GUCY1A2P33402 732 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 FUT2Q10981 343 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 COL4A5P29400 1685 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 GABPAQ06546 454 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 FER1L6Q2WGJ9 1857 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 TMTC3Q6ZXV5 915 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 LARGE2Q8N3Y3 721 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 USP28Q96RU2 1077 aa24.51■■□□□ 1.51
PPP1R3F-203ENST00000466508 ZNF277Q9NRM2 450 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms