RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CUL4AQ13619 759 aa14.24□□□□□ -0.13
VPS16-206ENST00000466415 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
VPS16-206ENST00000466415 APOBEC3FQ8IUX4 373 aaKnown RBP14.24□□□□□ -0.13
VPS16-206ENST00000466415 TMTC2Q8N394 836 aa14.24□□□□□ -0.13
VPS16-206ENST00000466415 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
VPS16-206ENST00000466415 GPHNQ9NQX3 736 aaPredicted RBP14.24□□□□□ -0.13
VPS16-206ENST00000466415 CNTNAP1P78357 1384 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 EGFRP00533 1210 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 EPS15P42566 896 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 GABPAQ06546 454 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
VPS16-206ENST00000466415 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 NKX2-3Q8TAU0 364 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 TRPM4Q8TD43 1214 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 IGDCC4Q8TDY8 1250 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 GTF3C6Q969F1 213 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 ZNF274Q96GC6 653 aaPredicted RBP14.23□□□□□ -0.13
VPS16-206ENST00000466415 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
VPS16-206ENST00000466415 ADARB2Q9NS39 739 aaKnown RBP14.23□□□□□ -0.13
VPS16-206ENST00000466415 HACL1Q9UJ83 578 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 SLC12A7Q9Y666 1083 aa14.23□□□□□ -0.13
VPS16-206ENST00000466415 MPHOSPH10O00566 681 aaKnown RBP14.22□□□□□ -0.13
VPS16-206ENST00000466415 PFKFB2O60825 505 aa14.22□□□□□ -0.13
VPS16-206ENST00000466415 SH3BP5LQ7L8J4 393 aa14.22□□□□□ -0.13
VPS16-206ENST00000466415 SGMS1Q86VZ5 419 aa14.22□□□□□ -0.13
VPS16-206ENST00000466415 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
VPS16-206ENST00000466415 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
VPS16-206ENST00000466415 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
VPS16-206ENST00000466415 SMC3Q9UQE7 1217 aa14.22□□□□□ -0.13
VPS16-206ENST00000466415 GOLGA8AA7E2F4 631 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 ZBTB43O43298 467 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 PDIA3P30101 505 aaKnown RBP14.21□□□□□ -0.13
VPS16-206ENST00000466415 SHMT1P34896 483 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS16-206ENST00000466415 EVCP57679 992 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 RASA3Q14644 834 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 ANGEL2Q5VTE6 544 aaKnown RBP14.21□□□□□ -0.13
VPS16-206ENST00000466415 CATIPQ7Z7H3 387 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
VPS16-206ENST00000466415 NEDD1Q8NHV4 660 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 CCDC17Q96LX7 622 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 KAT14Q9H8E8 782 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS16-206ENST00000466415 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 GGA3Q9NZ52 723 aa14.21□□□□□ -0.13
VPS16-206ENST00000466415 PLIN4Q96Q06 1357 aa14.21□□□□□ -0.14
VPS16-206ENST00000466415 ASTN2O75129 1339 aaPredicted RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 CPLX1O14810 134 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 CCT2P78371 535 aaKnown RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 SEC23AQ15436 765 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 CERKLQ49MI3 558 aaPredicted RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 CPLX2Q6PUV4 134 aaKnown RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 APOA5Q6Q788 366 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 RAB11FIP4Q86YS3 637 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 ZNF654Q8IZM8 581 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 L3MBTL3Q96JM7 780 aaPredicted RBP14.2□□□□□ -0.14
VPS16-206ENST00000466415 BRPF3Q9ULD4 1205 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 STX8Q9UNK0 236 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
VPS16-206ENST00000466415 MYH8P13535 1937 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 IQCA1LA6NCM1 817 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 NMT2O60551 498 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 DDAH1O94760 285 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 CALM1P0DP23 149 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 CALM2P0DP24 149 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 CALM3P0DP25 149 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 AKR1B1P15121 316 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 SCRN1Q12765 414 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 HOOK2Q96ED9 719 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 DNAJC18Q9H819 358 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
VPS16-206ENST00000466415 PITPNM2Q9BZ72 1349 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 CDKL5O76039 1030 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 EPHX2P34913 555 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 RCAN1P53805 252 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 ST3GAL1Q11201 340 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 RTN1Q16799 776 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 USP50Q70EL3 339 aaPredicted RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 METTL16Q86W50 562 aaKnown RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 CCDC144CPQ8IYA2 1237 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 DCPSQ96C86 337 aaKnown RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 LLPHQ9BRT6 129 aaKnown RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 MYL10Q9BUA6 226 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 DEFB129Q9H1M3 183 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 NCOA5Q9HCD5 579 aaKnown RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 CABP5Q9NP86 173 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 CHMP5Q9NZZ3 219 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 SCAF8Q9UPN6 1271 aaKnown RBP14.18□□□□□ -0.14
VPS16-206ENST00000466415 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 PPP2R3BQ9Y5P8 575 aa14.18□□□□□ -0.14
VPS16-206ENST00000466415 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms