RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 TRIM6-TRIM34B2RNG4 842 aa31.1■■■□□ 2.57
SMC4-206ENST00000465903 ASNSP08243 561 aa31.1■■■□□ 2.57
SMC4-206ENST00000465903 PRRT2Q7Z6L0 340 aaPredicted RBP31.1■■■□□ 2.57
SMC4-206ENST00000465903 RILPL2Q969X0 211 aa31.1■■■□□ 2.57
SMC4-206ENST00000465903 GINM1Q9NU53 330 aa31.1■■■□□ 2.57
SMC4-206ENST00000465903 USP17L5A8MUK1 530 aa31.09■■■□□ 2.57
SMC4-206ENST00000465903 CRHR2Q13324 411 aa31.09■■■□□ 2.57
SMC4-206ENST00000465903 TICAM2Q86XR7 235 aa31.09■■■□□ 2.57
SMC4-206ENST00000465903 DYNLL2Q96FJ2 89 aa31.09■■■□□ 2.57
SMC4-206ENST00000465903 EPB41L4AQ9HCS5 686 aaPredicted RBP31.09■■■□□ 2.57
SMC4-206ENST00000465903 ZBTB21Q9ULJ3 1066 aa31.09■■■□□ 2.57
SMC4-206ENST00000465903 GPR25O00155 361 aa31.08■■■□□ 2.57
SMC4-206ENST00000465903 GNAT2P19087 354 aa31.08■■■□□ 2.57
SMC4-206ENST00000465903 NOM1Q5C9Z4 860 aaKnown RBP31.08■■■□□ 2.57
SMC4-206ENST00000465903 GPAT2Q6NUI2 795 aa31.08■■■□□ 2.57
SMC4-206ENST00000465903 GIMAP6Q6P9H5 292 aa31.08■■■□□ 2.57
SMC4-206ENST00000465903 TRIM75PA6NK02 468 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 PATL2C9JE40 543 aaKnown RBP31.07■■■□□ 2.56
SMC4-206ENST00000465903 SPP2Q13103 211 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 CERKLQ49MI3 558 aaPredicted RBP31.07■■■□□ 2.56
SMC4-206ENST00000465903 CCDC129Q6ZRS4 1044 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 ANKRD23Q86SG2 305 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 SLC44A5Q8NCS7 719 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 ZNF280CQ8ND82 737 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 DDRGK1Q96HY6 314 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 WDR18Q9BV38 432 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 TBC1D2Q9BYX2 928 aa31.07■■■□□ 2.56
SMC4-206ENST00000465903 ZCCHC17Q9NP64 241 aaKnown RBP31.07■■■□□ 2.56
SMC4-206ENST00000465903 GH2P01242 217 aa31.06■■■□□ 2.56
SMC4-206ENST00000465903 SBK1Q52WX2 424 aa31.06■■■□□ 2.56
SMC4-206ENST00000465903 ZNF296Q8WUU4 475 aaPredicted RBP31.06■■■□□ 2.56
SMC4-206ENST00000465903 HELLSQ9NRZ9 838 aa31.06■■■□□ 2.56
SMC4-206ENST00000465903 TAF1CQ15572 869 aaPredicted RBP31.05■■■□□ 2.56
SMC4-206ENST00000465903 FAM227BQ96M60 508 aa31.05■■■□□ 2.56
SMC4-206ENST00000465903 LOC285556D6RIA3 1793 aa31.05■■■□□ 2.56
SMC4-206ENST00000465903 A0A0D9SFI3 127 aa31.04■■■□□ 2.56
SMC4-206ENST00000465903 IFNL3Q8IZI9 196 aa31.04■■■□□ 2.56
SMC4-206ENST00000465903 AS3MTQ9HBK9 375 aa31.04■■■□□ 2.56
SMC4-206ENST00000465903 ARPP21Q9UBL0 812 aaPredicted RBP31.04■■■□□ 2.56
SMC4-206ENST00000465903 SWAP70Q9UH65 585 aa31.04■■■□□ 2.56
SMC4-206ENST00000465903 TAOK2Q9UL54 1235 aa31.04■■■□□ 2.56
SMC4-206ENST00000465903 PDHXO00330 501 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 FOXP2O15409 715 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 SDSP20132 328 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 GUCY1A2P33402 732 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 NMIQ13287 307 aaPredicted RBP31.03■■■□□ 2.56
SMC4-206ENST00000465903 ABCB5Q2M3G0 1257 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 FASTKD5Q7L8L6 764 aaKnown RBP31.03■■■□□ 2.56
SMC4-206ENST00000465903 AMOTL1Q8IY63 956 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 ZFYVE28Q9HCC9 887 aa31.03■■■□□ 2.56
SMC4-206ENST00000465903 CDK8P49336 464 aa31.02■■■□□ 2.56
SMC4-206ENST00000465903 SH3D19Q5HYK7 790 aa31.02■■■□□ 2.56
SMC4-206ENST00000465903 TTC22Q5TAA0 569 aa31.02■■■□□ 2.56
SMC4-206ENST00000465903 GADL1Q6ZQY3 521 aa31.02■■■□□ 2.56
SMC4-206ENST00000465903 C16orf86Q6ZW13 317 aa31.02■■■□□ 2.56
SMC4-206ENST00000465903 APPP05067 770 aa31.01■■■□□ 2.55
SMC4-206ENST00000465903 GSPT1P15170 499 aaKnown RBP31.01■■■□□ 2.55
SMC4-206ENST00000465903 FKTNO75072 461 aa31■■■□□ 2.55
SMC4-206ENST00000465903 DGKZQ13574 1117 aa31■■■□□ 2.55
SMC4-206ENST00000465903 MCMDC2Q4G0Z9 681 aa31■■■□□ 2.55
SMC4-206ENST00000465903 CABP5Q9NP86 173 aa31■■■□□ 2.55
SMC4-206ENST00000465903 MINDY4BA8MYZ0 360 aa30.99■■■□□ 2.55
SMC4-206ENST00000465903 TDO2P48775 406 aa30.99■■■□□ 2.55
SMC4-206ENST00000465903 HMGCS2P54868 508 aa30.99■■■□□ 2.55
SMC4-206ENST00000465903 BACE1P56817 501 aa30.99■■■□□ 2.55
SMC4-206ENST00000465903 VPS53Q5VIR6 699 aa30.99■■■□□ 2.55
SMC4-206ENST00000465903 PROCA1Q8NCQ7 364 aaPredicted RBP30.99■■■□□ 2.55
SMC4-206ENST00000465903 TLR2O60603 784 aa30.98■■■□□ 2.55
SMC4-206ENST00000465903 CENPQQ7L2Z9 268 aaPredicted RBP30.98■■■□□ 2.55
SMC4-206ENST00000465903 TNS4Q8IZW8 715 aa30.98■■■□□ 2.55
SMC4-206ENST00000465903 USP17L10C9JJH3 530 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 AKR1B1P15121 316 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 MTMR2Q13614 643 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 SEPT2Q15019 361 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 RAB3GAP1Q15042 981 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 TREML2Q5T2D2 321 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 ZNF589Q86UQ0 364 aaPredicted RBP30.97■■■□□ 2.55
SMC4-206ENST00000465903 NACAP1Q9BZK3 213 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 AGTPBP1Q9UPW5 1226 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 ADGRA2Q96PE1 1338 aa30.97■■■□□ 2.55
SMC4-206ENST00000465903 ROBO3Q96MS0 1386 aa30.96■■■□□ 2.55
SMC4-206ENST00000465903 SLC45A1Q9Y2W3 748 aa30.96■■■□□ 2.55
SMC4-206ENST00000465903 GREB1LQ9C091 1923 aaPredicted RBP30.95■■■□□ 2.55
SMC4-206ENST00000465903 C19orf81C9J6K1 198 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 CENPBP07199 599 aaPredicted RBP30.95■■■□□ 2.55
SMC4-206ENST00000465903 CYP2C8P10632 490 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 C17orf99Q6UX52 265 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 STK11IPQ8N1F8 1099 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 ACER1Q8TDN7 264 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 CCDC17Q96LX7 622 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 NAPBQ9H115 298 aa30.95■■■□□ 2.55
SMC4-206ENST00000465903 MPHOSPH10O00566 681 aaKnown RBP30.94■■■□□ 2.54
SMC4-206ENST00000465903 SP3Q02447 781 aa30.94■■■□□ 2.54
SMC4-206ENST00000465903 EMILIN3Q9NT22 766 aa30.94■■■□□ 2.54
SMC4-206ENST00000465903 CAP1Q01518 475 aa30.93■■■□□ 2.54
SMC4-206ENST00000465903 ALX1Q15699 326 aa30.93■■■□□ 2.54
SMC4-206ENST00000465903 CWC27Q6UX04 472 aaKnown RBP30.93■■■□□ 2.54
SMC4-206ENST00000465903 TMEM179Q6ZVK1 233 aa30.93■■■□□ 2.54
SMC4-206ENST00000465903 NEFLP07196 543 aa30.92■■■□□ 2.54
SMC4-206ENST00000465903 CTU1Q7Z7A3 348 aaKnown RBP30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms