RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MOGSQ13724 837 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 TAF1CQ15572 869 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-206ENST00000465877 TATDN1Q6P1N9 297 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 PLEKHM2Q8IWE5 1019 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 ZNF296Q8WUU4 475 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-206ENST00000465877 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 TBC1D2Q9BYX2 928 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 OSBPL3Q9H4L5 887 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 ARPP21Q9UBL0 812 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-206ENST00000465877 ROBO3Q96MS0 1386 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 CXCL11O14625 94 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 SHMT1P34896 483 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 JAG1P78504 1218 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 ZMYM1Q5SVZ6 1142 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 ANKRD23Q86SG2 305 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
COL5A1-206ENST00000465877 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
COL5A1-206ENST00000465877 AS3MTQ9HBK9 375 aa15.49■□□□□ 0.07
COL5A1-206ENST00000465877 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
COL5A1-206ENST00000465877 CYP2D7A0A087X1C5 515 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 TRIM6-TRIM34B2RNG4 842 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 GADL1Q6ZQY3 521 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 ZNF280CQ8ND82 737 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 ZFYVE28Q9HCC9 887 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 GINM1Q9NU53 330 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 A0A0G2JMZ2 1700 aa15.48■□□□□ 0.07
COL5A1-206ENST00000465877 GH2P01242 217 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 GNAT2P19087 354 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 PDE4AP27815 886 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 C12orf60Q5U649 245 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 SLC44A5Q8NCS7 719 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 SWAP70Q9UH65 585 aa15.47■□□□□ 0.07
COL5A1-206ENST00000465877 ADGRA2Q96PE1 1338 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 GSG1L2A8MUP6 293 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 USP17L21D6R901 530 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 SMIM22K7EJ46 135 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 PDHXO00330 501 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 FKTNO75072 461 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 SPP2Q13103 211 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 MTMR2Q13614 643 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 CERKLQ49MI3 558 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-206ENST00000465877 GPAT2Q6NUI2 795 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 CCDC129Q6ZRS4 1044 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 FASTKD5Q7L8L6 764 aaKnown RBP15.46■□□□□ 0.07
COL5A1-206ENST00000465877 PROCA1Q8NCQ7 364 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-206ENST00000465877 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 PARK7Q99497 189 aaKnown RBP15.46■□□□□ 0.07
COL5A1-206ENST00000465877 WDR18Q9BV38 432 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 TAOK2Q9UL54 1235 aa15.46■□□□□ 0.07
COL5A1-206ENST00000465877 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 TDO2P48775 406 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 HMGCS2P54868 508 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 DGKZQ13574 1117 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 CTR9Q6PD62 1173 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 AGTPBP1Q9UPW5 1226 aa15.45■□□□□ 0.06
COL5A1-206ENST00000465877 BRCA2P51587 3418 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 TLR2O60603 784 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 BACE1P56817 501 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 RAB3GAP1Q15042 981 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 SBK1Q52WX2 424 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 SH3D19Q5HYK7 790 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 TREML2Q5T2D2 321 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
COL5A1-206ENST00000465877 TICAM2Q86XR7 235 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 FAM227BQ96M60 508 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 MCOLN1Q9GZU1 580 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 SLC45A1Q9Y2W3 748 aa15.44■□□□□ 0.06
COL5A1-206ENST00000465877 RLFQ13129 1914 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 MPHOSPH10O00566 681 aaKnown RBP15.43■□□□□ 0.06
COL5A1-206ENST00000465877 FOXP2O15409 715 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 APPP05067 770 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 NMIQ13287 307 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-206ENST00000465877 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 CABP5Q9NP86 173 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 HELLSQ9NRZ9 838 aa15.43■□□□□ 0.06
COL5A1-206ENST00000465877 RBBP6Q7Z6E9 1792 aaKnown RBP15.43■□□□□ 0.06
COL5A1-206ENST00000465877 COL11A1P12107 1806 aaPredicted RBP15.43■□□□□ 0.06
COL5A1-206ENST00000465877 MINDY4BA8MYZ0 360 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 PATL2C9JE40 543 aaKnown RBP15.42■□□□□ 0.06
COL5A1-206ENST00000465877 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 CYP2C8P10632 490 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 GSPT1P15170 499 aaKnown RBP15.42■□□□□ 0.06
COL5A1-206ENST00000465877 GUCY1A2P33402 732 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 CDK8P49336 464 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 SP3Q02447 781 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 TTC22Q5TAA0 569 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 TMEM179Q6ZVK1 233 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 ZNF589Q86UQ0 364 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-206ENST00000465877 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 CD99L2Q8TCZ2 262 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 FEZ1Q99689 392 aa15.42■□□□□ 0.06
COL5A1-206ENST00000465877 NAPBQ9H115 298 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms