RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 CABP4P57796 275 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 AAMPQ13685 434 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 NME9Q86XW9 330 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 FAM46AQ96IP4 442 aaKnown RBP6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 OSMRQ99650 979 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 CEP41Q9BYV8 373 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 OSGEPQ9NPF4 335 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 TRPC5Q9UL62 973 aaPredicted RBP6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 SOX13Q9UN79 622 aa6.73□□□□□ -1.33
EXOSC3-204ENST00000465860 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 PHACTR2O75167 634 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 FAM13AO94988 1023 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 GCP02774 474 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 FBLN1P23142 703 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 FKBP4Q02790 459 aaKnown RBP eCLIP6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 VPS72Q15906 364 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 SLC51AQ86UW1 340 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 TMEM102Q8N9M5 508 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 SLC7A3Q8WY07 619 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 WNT8BQ93098 351 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 ZKSCAN3Q9BRR0 538 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 ANO2Q9NQ90 1003 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 RGPD2P0DJD1 1756 aa6.72□□□□□ -1.33
EXOSC3-204ENST00000465860 WNK3Q9BYP7 1800 aa6.71□□□□□ -1.33
EXOSC3-204ENST00000465860 DHX15O43143 795 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 ABL1P00519 1130 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 HSPA5P11021 654 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 NLRP12P59046 1061 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 ZNF211Q13398 564 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 UVSSAQ2YD98 709 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 SNX29Q8TEQ0 813 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 UTP4Q969X6 686 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 STOML1Q9UBI4 398 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 MTMR7Q9Y216 660 aa6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 COL5A2P05997 1499 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-204ENST00000465860 BRD4O60885 1362 aaPredicted RBP6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 CPDO75976 1380 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 OVOS2A0A0J9YW53 1432 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 OVOS2Q6IE36 1432 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 EDC4Q6P2E9 1401 aaKnown RBP6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 USP5P45974 858 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 EHHADHQ08426 723 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 GJD3Q8N144 294 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 PUS7Q96PZ0 661 aaKnown RBP6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 SPATA31A5Q5VU36 1347 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 SPATA31A7Q8IWB4 1347 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 TTC21AQ8NDW8 1320 aa6.7□□□□□ -1.34
EXOSC3-204ENST00000465860 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 EDN3P14138 238 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 TMF1P82094 1093 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 PEAR1Q5VY43 1037 aaPredicted RBP6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 VN1R5Q7Z5H4 357 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 ARHGEF25Q86VW2 580 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 BSNDQ8WZ55 320 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 MYRFLQ96LU7 910 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 LATS2Q9NRM7 1088 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 CCDC9Q9Y3X0 531 aaKnown RBP6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 PEAK1Q9H792 1746 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 SPATA31A1Q5TZJ5 1347 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 ANKRD36BQ8N2N9 1353 aa6.69□□□□□ -1.34
EXOSC3-204ENST00000465860 HMX2A2RU54 273 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 GSC2O15499 205 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 SSTR4P31391 388 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 PREPP48147 710 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 HDGFL2Q7Z4V5 671 aaPredicted RBP6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 TRIM42Q8IWZ5 723 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 RUSC1Q9BVN2 902 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 C7orf69Q9H7B7 122 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 AATKQ6ZMQ8 1374 aa6.68□□□□□ -1.34
EXOSC3-204ENST00000465860 TNS1Q9HBL0 1735 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 PARP4Q9UKK3 1724 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 MAP2P11137 1827 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 FYB1O15117 783 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 MED26O95402 600 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 CD97P48960 835 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 ARL4DP49703 201 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 NFIAQ12857 509 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 IKBKEQ14164 716 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 FAM20CQ8IXL6 584 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 ASAP3Q8TDY4 903 aa6.67□□□□□ -1.34
EXOSC3-204ENST00000465860 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms