RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 SCARA3Q6AZY7 606 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 KIAA0825Q8IV33 1275 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 RHOVQ96L33 236 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 SPON2Q9BUD6 331 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 CAPN10Q9HC96 672 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 CEP152O94986 1710 aa9.24□□□□□ -0.93
SPTA1-203ENST00000465741 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
SPTA1-203ENST00000465741 CLTCL1P53675 1640 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 CAMSAP1Q5T5Y3 1602 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 LTKP29376 864 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 EIF4A3P38919 411 aaKnown RBP9.23□□□□□ -0.93
SPTA1-203ENST00000465741 RAC1P63000 192 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
SPTA1-203ENST00000465741 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
SPTA1-203ENST00000465741 TMEM132EQ6IEE7 984 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 LLGL2Q6P1M3 1020 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 CORO1BQ9BR76 489 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
SPTA1-203ENST00000465741 SYNMO15061 1565 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 F6X3S4 739 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 BMP6P22004 513 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 CAMK2GQ13555 558 aaPredicted RBP9.22□□□□□ -0.93
SPTA1-203ENST00000465741 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
SPTA1-203ENST00000465741 SNAP47Q5SQN1 464 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
SPTA1-203ENST00000465741 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 TINF2Q9BSI4 451 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 CARD10Q9BWT7 1032 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
SPTA1-203ENST00000465741 CLTCQ00610 1675 aaKnown RBP9.22□□□□□ -0.93
SPTA1-203ENST00000465741 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
SPTA1-203ENST00000465741 A2ML1A8K2U0 1454 aa9.21□□□□□ -0.93
SPTA1-203ENST00000465741 SPATA31D1Q6ZQQ2 1576 aa9.21□□□□□ -0.93
SPTA1-203ENST00000465741 PF4P02776 101 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 GSTP1P09211 210 aaKnown RBP9.21□□□□□ -0.94
SPTA1-203ENST00000465741 SETDB1Q15047 1291 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 POU4F3Q15319 338 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.94
SPTA1-203ENST00000465741 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
SPTA1-203ENST00000465741 VPS37DQ86XT2 251 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 TRIM42Q8IWZ5 723 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 SLC43A3Q8NBI5 491 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 TRIM11Q96F44 468 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 SPATA32Q96LK8 384 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 TMEM2Q9UHN6 1383 aa9.21□□□□□ -0.94
SPTA1-203ENST00000465741 ZC3H13Q5T200 1668 aaKnown RBP9.2□□□□□ -0.94
SPTA1-203ENST00000465741 TFE3P19532 575 aaPredicted RBP9.2□□□□□ -0.94
SPTA1-203ENST00000465741 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
SPTA1-203ENST00000465741 ZNF296Q8WUU4 475 aaPredicted RBP9.2□□□□□ -0.94
SPTA1-203ENST00000465741 KLHDC7BQ96G42 594 aa9.2□□□□□ -0.94
SPTA1-203ENST00000465741 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
SPTA1-203ENST00000465741 NOP53Q9NZM5 478 aaKnown RBP9.2□□□□□ -0.94
SPTA1-203ENST00000465741 STK26Q9P289 416 aa9.2□□□□□ -0.94
SPTA1-203ENST00000465741 PREX1Q8TCU6 1659 aa9.2□□□□□ -0.94
SPTA1-203ENST00000465741 TRIM37O94972 964 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 CD68P34810 354 aaPredicted RBP9.19□□□□□ -0.94
SPTA1-203ENST00000465741 GJA8P48165 433 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 PAK2Q13177 524 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 HGSNATQ68CP4 663 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 ANKLE2Q86XL3 938 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 GOLM1Q8NBJ4 401 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 SREK1Q8WXA9 508 aaKnown RBP9.19□□□□□ -0.94
SPTA1-203ENST00000465741 KCNB2Q92953 911 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 GPRASP2Q96D09 838 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 ADAMTS1Q9UHI8 967 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 USP47Q96K76 1375 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 NLRP1Q9C000 1473 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 ADGRB3O60242 1522 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 SPHKAPQ2M3C7 1700 aa9.19□□□□□ -0.94
SPTA1-203ENST00000465741 A0A0A0MRY4 1105 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 TNNI2P48788 182 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 ZNF252P-AS1Q0IIN9 211 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 GPRASP1Q5JY77 1395 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 ZMYM1Q5SVZ6 1142 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 MAP1SQ66K74 1059 aaPredicted RBP9.18□□□□□ -0.94
SPTA1-203ENST00000465741 PDZD3Q86UT5 571 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 FBXO11Q86XK2 927 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
SPTA1-203ENST00000465741 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 NT5C1AQ9BXI3 368 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 KRT82Q9NSB4 513 aa9.18□□□□□ -0.94
SPTA1-203ENST00000465741 RALGAPBQ86X10 1494 aa9.17□□□□□ -0.94
SPTA1-203ENST00000465741 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
SPTA1-203ENST00000465741 MAOBP27338 520 aa9.17□□□□□ -0.94
SPTA1-203ENST00000465741 NLRP12P59046 1061 aa9.17□□□□□ -0.94
SPTA1-203ENST00000465741 DDX10Q13206 875 aaKnown RBP9.17□□□□□ -0.94
SPTA1-203ENST00000465741 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
SPTA1-203ENST00000465741 RSPO4Q2I0M5 234 aaPredicted RBP9.17□□□□□ -0.94
SPTA1-203ENST00000465741 FBXL19Q6PCT2 694 aa9.17□□□□□ -0.94
SPTA1-203ENST00000465741 GALNT11Q8NCW6 608 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms