RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MTMR2Q13614 643 aa25.42■■□□□ 1.66
CSPG5-204ENST00000465441 UNC93B1Q9H1C4 597 aa25.42■■□□□ 1.66
CSPG5-204ENST00000465441 GINM1Q9NU53 330 aa25.42■■□□□ 1.66
CSPG5-204ENST00000465441 CDK5RAP2Q96SN8 1893 aa25.41■■□□□ 1.66
CSPG5-204ENST00000465441 RPAP2Q8IXW5 612 aaPredicted RBP25.41■■□□□ 1.66
CSPG5-204ENST00000465441 COG6Q9Y2V7 657 aa25.41■■□□□ 1.66
CSPG5-204ENST00000465441 DOCK3Q8IZD9 2030 aa25.41■■□□□ 1.66
CSPG5-204ENST00000465441 C19orf81C9J6K1 198 aa25.4■■□□□ 1.66
CSPG5-204ENST00000465441 HABP4Q5JVS0 413 aaKnown RBP25.4■■□□□ 1.66
CSPG5-204ENST00000465441 CERS3Q8IU89 383 aa25.4■■□□□ 1.66
CSPG5-204ENST00000465441 P2RX7Q99572 595 aaKnown RBP25.4■■□□□ 1.66
CSPG5-204ENST00000465441 TMOD4Q9NZQ9 345 aa25.4■■□□□ 1.66
CSPG5-204ENST00000465441 ZBTB21Q9ULJ3 1066 aa25.4■■□□□ 1.66
CSPG5-204ENST00000465441 USP17L10C9JJH3 530 aa25.39■■□□□ 1.66
CSPG5-204ENST00000465441 INHAP05111 366 aa25.39■■□□□ 1.66
CSPG5-204ENST00000465441 HOXA7P31268 230 aaPredicted RBP25.39■■□□□ 1.66
CSPG5-204ENST00000465441 SIRT2Q8IXJ6 389 aa25.39■■□□□ 1.66
CSPG5-204ENST00000465441 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.66
CSPG5-204ENST00000465441 TAOK2Q9UL54 1235 aa25.39■■□□□ 1.66
CSPG5-204ENST00000465441 FOCADQ5VW36 1801 aa25.39■■□□□ 1.65
CSPG5-204ENST00000465441 APBB1O00213 710 aa25.38■■□□□ 1.65
CSPG5-204ENST00000465441 SGPL1O95470 568 aa25.38■■□□□ 1.65
CSPG5-204ENST00000465441 TMED8Q6PL24 325 aaPredicted RBP25.38■■□□□ 1.65
CSPG5-204ENST00000465441 CLASRPQ8N2M8 674 aaKnown RBP25.38■■□□□ 1.65
CSPG5-204ENST00000465441 U2AF1L4Q8WU68 220 aaKnown RBP25.38■■□□□ 1.65
CSPG5-204ENST00000465441 DDX19BQ9UMR2 479 aa25.38■■□□□ 1.65
CSPG5-204ENST00000465441 LOC285556D6RIA3 1793 aa25.38■■□□□ 1.65
CSPG5-204ENST00000465441 IRX3P78415 501 aaPredicted RBP25.37■■□□□ 1.65
CSPG5-204ENST00000465441 TATDN1Q6P1N9 297 aa25.37■■□□□ 1.65
CSPG5-204ENST00000465441 UBE2Q1Q7Z7E8 422 aa25.37■■□□□ 1.65
CSPG5-204ENST00000465441 KIF1BPQ96EK5 621 aa25.37■■□□□ 1.65
CSPG5-204ENST00000465441 MORF4L1Q9UBU8 362 aa25.37■■□□□ 1.65
CSPG5-204ENST00000465441 GJD2Q9UKL4 321 aa25.37■■□□□ 1.65
CSPG5-204ENST00000465441 GH2P01242 217 aa25.36■■□□□ 1.65
CSPG5-204ENST00000465441 TTF1Q15361 905 aaPredicted RBP25.36■■□□□ 1.65
CSPG5-204ENST00000465441 DPF3Q92784 378 aa25.36■■□□□ 1.65
CSPG5-204ENST00000465441 RIOK1Q9BRS2 568 aaKnown RBP25.36■■□□□ 1.65
CSPG5-204ENST00000465441 PEX10O60683 326 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 HMMRO75330 724 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 TTC6Q86TZ1 520 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 BCL11AQ9H165 835 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 EMILIN3Q9NT22 766 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 PCDH10Q9P2E7 1040 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 SERPINB13Q9UIV8 391 aa25.35■■□□□ 1.65
CSPG5-204ENST00000465441 H0YGN5 161 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 IFIT2P09913 472 aaKnown RBP25.34■■□□□ 1.65
CSPG5-204ENST00000465441 PLCD1P51178 756 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 HERVK_113P62684 666 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 SLC9C2Q5TAH2 1124 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 USP17L2Q6R6M4 530 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.34■■□□□ 1.65
CSPG5-204ENST00000465441 EHD4Q9H223 541 aa25.34■■□□□ 1.65
CSPG5-204ENST00000465441 MYH1P12882 1939 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 MAGEB6P1A0A0J9YX57 407 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 RAB11FIP3O75154 756 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 CERKLQ49MI3 558 aaPredicted RBP25.33■■□□□ 1.65
CSPG5-204ENST00000465441 DEFB118Q96PH6 123 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 TXNRD2Q9NNW7 524 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 RBPJLQ9UBG7 517 aa25.33■■□□□ 1.65
CSPG5-204ENST00000465441 COLQQ9Y215 455 aaPredicted RBP25.33■■□□□ 1.65
CSPG5-204ENST00000465441 GOLIM4O00461 696 aa25.32■■□□□ 1.64
CSPG5-204ENST00000465441 TFRCP02786 760 aaKnown RBP25.32■■□□□ 1.64
CSPG5-204ENST00000465441 PDE6AP16499 860 aa25.32■■□□□ 1.64
CSPG5-204ENST00000465441 Q3C1V9 767 aa25.32■■□□□ 1.64
CSPG5-204ENST00000465441 GPRC5AQ8NFJ5 357 aa25.32■■□□□ 1.64
CSPG5-204ENST00000465441 DNAJC2Q99543 621 aaKnown RBP25.32■■□□□ 1.64
CSPG5-204ENST00000465441 RCAN3Q9UKA8 241 aa25.32■■□□□ 1.64
CSPG5-204ENST00000465441 PAK6Q9NQU5 681 aaPredicted RBP25.31■■□□□ 1.64
CSPG5-204ENST00000465441 ZNF532Q9HCE3 1301 aa25.31■■□□□ 1.64
CSPG5-204ENST00000465441 FARP2O94887 1054 aaPredicted RBP25.3■■□□□ 1.64
CSPG5-204ENST00000465441 POLR3DP05423 398 aaPredicted RBP25.3■■□□□ 1.64
CSPG5-204ENST00000465441 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
CSPG5-204ENST00000465441 ABCB5Q2M3G0 1257 aa25.3■■□□□ 1.64
CSPG5-204ENST00000465441 POTEEQ6S8J3 1075 aa25.3■■□□□ 1.64
CSPG5-204ENST00000465441 EDC3Q96F86 508 aaKnown RBP25.3■■□□□ 1.64
CSPG5-204ENST00000465441 HTATIP2Q9BUP3 242 aa25.3■■□□□ 1.64
CSPG5-204ENST00000465441 CHMP4BQ9H444 224 aaKnown RBP25.3■■□□□ 1.64
CSPG5-204ENST00000465441 TCRBV5S4A2TA0A5A2 114 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 CAPN2P17655 700 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 SHMT1P34896 483 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 ZYXQ15942 572 aaKnown RBP25.29■■□□□ 1.64
CSPG5-204ENST00000465441 C12orf42Q96LP6 360 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 BOLA2Q9H3K6 86 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 CABP5Q9NP86 173 aa25.29■■□□□ 1.64
CSPG5-204ENST00000465441 CYP2B6P20813 491 aa25.28■■□□□ 1.64
CSPG5-204ENST00000465441 TRIM32Q13049 653 aa25.28■■□□□ 1.64
CSPG5-204ENST00000465441 ACER1Q8TDN7 264 aa25.28■■□□□ 1.64
CSPG5-204ENST00000465441 CRNKL1Q9BZJ0 848 aaKnown RBP25.28■■□□□ 1.64
CSPG5-204ENST00000465441 CRISPLD2Q9H0B8 497 aa25.28■■□□□ 1.64
CSPG5-204ENST00000465441 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.28■■□□□ 1.64
CSPG5-204ENST00000465441 HMGCRP04035 888 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 ERVK-9P63128 1117 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 ERVK-24P63145 666 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 EVX2Q03828 476 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 GABPAQ06546 454 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 FEZ1Q99689 392 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 NUDT12Q9BQG2 462 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 PAGR1Q9BTK6 254 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 MCM9Q9NXL9 1143 aa25.27■■□□□ 1.64
CSPG5-204ENST00000465441 USP17L15C9J2P7 530 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms