RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 FIBPO43427 364 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 CTDNEP1O95476 244 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 PDCP20941 246 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 PDIA3P30101 505 aaKnown RBP9.74□□□□□ -0.85
UBE4B-205ENST00000465408 HIBADHP31937 336 aaKnown RBP9.74□□□□□ -0.85
UBE4B-205ENST00000465408 TDO2P48775 406 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 DYNLL1P63167 89 aaKnown RBP9.74□□□□□ -0.85
UBE4B-205ENST00000465408 LRIT3Q3SXY7 679 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 SLC9C1Q4G0N8 1177 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 TXNRD3Q86VQ6 643 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 NSUN7Q8NE18 718 aaKnown RBP9.74□□□□□ -0.85
UBE4B-205ENST00000465408 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 EFCC1Q9HA90 598 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 DOCK2Q92608 1830 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 IRS2Q9Y4H2 1338 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 LAMA4Q16363 1823 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 B4E1Z4 1266 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 SEMA3EO15041 775 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 GPSM2P81274 684 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 DNM1Q05193 864 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 TRDNQ13061 729 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 TBC1D10BQ4KMP7 808 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 L1TD1Q5T7N2 865 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 NAA16Q6N069 864 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 FAM173BQ6P4H8 233 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 UBE2Q1Q7Z7E8 422 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ALYREFQ86V81 257 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 FAM184AQ8NB25 1140 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ZNF384Q8TF68 577 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 DCPSQ96C86 337 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ZNF274Q96GC6 653 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 RBM17Q96I25 401 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
UBE4B-205ENST00000465408 HTATIP2Q9BUP3 242 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ZNRF3Q9ULT6 936 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 PTCH2Q9Y6C5 1203 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 ZMYM6O95789 1325 aa9.73□□□□□ -0.85
UBE4B-205ENST00000465408 H7C1D1 291 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 SH2B2O14492 632 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-205ENST00000465408 RAD17O75943 681 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 MBD3O95983 291 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 GNAT2P19087 354 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 ALDH1B1P30837 517 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 MECOMQ03112 1051 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 NBPF11Q86T75 865 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 SDR42E1Q8WUS8 393 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 GDF15Q99988 308 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 LEMD3Q9Y2U8 911 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 ATP6V1DQ9Y5K8 247 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 XDHP47989 1333 aa9.72□□□□□ -0.85
UBE4B-205ENST00000465408 UBE2Q2LH0YL09 131 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 H3BQV1 296 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 SMIM22K7EJ46 135 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 PPEF1O14829 653 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 UFL1O94874 794 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 RESTQ13127 1097 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 CRY2Q49AN0 593 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 FBXL16Q8N461 479 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 NSUN4Q96CB9 384 aaKnown RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 TOMM22Q9NS69 142 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 TMEM63CQ9P1W3 806 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 ASTN2O75129 1339 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 PDS5AQ29RF7 1337 aaKnown RBP9.71□□□□□ -0.86
UBE4B-205ENST00000465408 WDR19Q8NEZ3 1342 aa9.71□□□□□ -0.86
UBE4B-205ENST00000465408 CYP2D7A0A087X1C5 515 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 MINDY4BA8MYZ0 360 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 KDM4AO75164 1064 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 XRCC6P12956 609 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBE4B-205ENST00000465408 RXRAP19793 462 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 PRDX5P30044 214 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 BMP8BP34820 402 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 EVCP57679 992 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 FKBP1BP68106 108 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 HMGN5P82970 282 aaKnown RBP9.7□□□□□ -0.86
UBE4B-205ENST00000465408 GUCY1B3Q02153 619 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 PPARAQ07869 468 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 GRIK5Q16478 980 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 AKNAD1Q5T1N1 836 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 CC2D2BQ6DHV5 1058 aa9.7□□□□□ -0.86
UBE4B-205ENST00000465408 NFXL1Q6ZNB6 911 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms