RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 LAMA4Q16363 1823 aa19.96■□□□□ 0.79
EXOSC3-203ENST00000465229 PSMA5P28066 241 aa19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.784e-6■■■■□ 21.6
EXOSC3-203ENST00000465229 RRP1BQ14684 758 aaKnown RBP19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 ZNF444Q8N0Y2 327 aaPredicted RBP19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 SPRYD3Q8NCJ5 442 aa19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 ZSWIM6Q9HCJ5 1215 aa19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 LAMB1P07942 1786 aa19.95■□□□□ 0.78
EXOSC3-203ENST00000465229 PHF20L1A8MW92 1017 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 RANBP6O60518 1105 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 KDM4AO75164 1064 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 ITGBL1O95965 494 aaPredicted RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 DCAF15Q66K64 600 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 RALYLQ86SE5 291 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 MB21D2Q8IYB1 491 aaPredicted RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 ESR2Q92731 530 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 ZSWIM5Q9P217 1185 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 FZD1Q9UP38 647 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 SSC5DA1L4H1 1573 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 HSP90AA1P07900 732 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 CPA1P15085 419 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 CASTP20810 708 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 CERKLQ49MI3 558 aaPredicted RBP19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 FAM47AQ5JRC9 791 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 CYB5R4Q7L1T6 521 aa19.94■□□□□ 0.78
EXOSC3-203ENST00000465229 HMGB1P09429 215 aaKnown RBP19.93■□□□□ 0.78
EXOSC3-203ENST00000465229 TFAP4Q01664 338 aa19.93■□□□□ 0.78
EXOSC3-203ENST00000465229 ZNF341Q9BYN7 854 aa19.93■□□□□ 0.78
EXOSC3-203ENST00000465229 UPF3BQ9BZI7 483 aaKnown RBP19.93■□□□□ 0.78
EXOSC3-203ENST00000465229 USP2O75604 605 aaPredicted RBP19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 AKR1B1P15121 316 aa19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 EXOSC10Q01780 885 aaKnown RBP19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 BLOC1S2Q6QNY1 142 aa19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 DHX32Q7L7V1 743 aaKnown RBP19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 CHST3Q7LGC8 479 aa19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 CCDC17Q96LX7 622 aa19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
EXOSC3-203ENST00000465229 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 MCM5P33992 734 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 NF2P35240 595 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 NT5C2P49902 561 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 ANTXR2P58335 489 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 JAG1P78504 1218 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 PRKG1Q13976 671 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 SHROOM1Q2M3G4 852 aaPredicted RBP19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 RUFY3Q7L099 469 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 KLRG1Q96E93 195 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 CYP46A1Q9Y6A2 500 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 PPP1R12BO60237 982 aaPredicted RBP19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 TOMM70O94826 608 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 TSPY3P0CV98 308 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 TSPY8P0CW00 308 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 RPS6KB1P23443 525 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 NEK4P51957 841 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 NEDD1Q8NHV4 660 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 TCEANC2Q96MN5 208 aa19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
EXOSC3-203ENST00000465229 PRC1O43663 620 aa19.9■□□□□ 0.78
EXOSC3-203ENST00000465229 GDF11O95390 407 aa19.9■□□□□ 0.78
EXOSC3-203ENST00000465229 INPP5BP32019 993 aa19.9■□□□□ 0.78
EXOSC3-203ENST00000465229 CAP2P40123 477 aa19.9■□□□□ 0.78
EXOSC3-203ENST00000465229 ABCB5Q2M3G0 1257 aa19.9■□□□□ 0.78
EXOSC3-203ENST00000465229 MPHOSPH10O00566 681 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 NMT2O60551 498 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 RAB3GAP1Q15042 981 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 RBM46Q8TBY0 533 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 WRNIP1Q96S55 665 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 ZKSCAN3Q9BRR0 538 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 ZNF408Q9H9D4 720 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 IL17RBQ9NRM6 502 aa19.89■□□□□ 0.77
EXOSC3-203ENST00000465229 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 GH2P01242 217 aa19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 MOB2Q70IA6 237 aa19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 LRRC2Q9BYS8 371 aa19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
EXOSC3-203ENST00000465229 GUCY1A2P33402 732 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 MAP3K11Q16584 847 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 IQCA1Q86XH1 822 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 IGDCC4Q8TDY8 1250 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 ZKSCAN4Q969J2 545 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 ZSCAN10Q96SZ4 725 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 CABP5Q9NP86 173 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 GPHNQ9NQX3 736 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 ANGEL1Q9UNK9 670 aaKnown RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 WDR19Q8NEZ3 1342 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 IGKV6D-41A0A0C4DH26 115 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 CELF2O95319 508 aaKnown RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 IREB2P48200 963 aaKnown RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 MAP3K9P80192 1104 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 TTLL12Q14166 644 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 CST9Q5W186 159 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 TMEM179Q6ZVK1 233 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 TTC14Q96N46 770 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 UBAC1Q9BSL1 405 aa19.87■□□□□ 0.77
EXOSC3-203ENST00000465229 ZBTB21Q9ULJ3 1066 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms