RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 TSPYL1Q9H0U9 437 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 MMP1P03956 469 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 GYPCP04921 128 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 DPYDQ12882 1025 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 CASP8Q14790 479 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 PSD3Q9NYI0 1048 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 RAB21Q9UL25 225 aa14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 CTAGE9A4FU28 777 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 SNAP23O00161 211 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 ERVK-24P63145 666 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 METTL24Q5JXM2 366 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 LEKR1Q6ZMV7 388 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 ADD3Q9UEY8 706 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 WNT7AO00755 349 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 EARS2Q5JPH6 523 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 CEP112Q8N8E3 955 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 HNRNPLLQ8WVV9 542 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
CLCNKA-204ENST00000464764 ENC1O14682 589 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 MFAP3LO75121 409 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 MSANTD4Q8NCY6 345 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 NUP133Q8WUM0 1156 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 SLF1Q9BQI6 1058 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 PRKAB2O43741 272 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 ZMYND10O75800 440 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 USP5P45974 858 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 SAFBQ15424 915 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 VPS16Q9H269 839 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 DACH1Q9UI36 760 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 C4BP0C0L5 1744 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 WDR19Q8NEZ3 1342 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 PBX1P40424 430 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 NOM1Q5C9Z4 860 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 RIN2Q8WYP3 895 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 SHISA4Q96DD7 197 aa14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-204ENST00000464764 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 PDE6AP16499 860 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 PHKA1P46020 1223 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 IFIT5Q13325 482 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 SPATA1Q5VX52 437 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 BLZF1Q9H2G9 400 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CTAGE15A4D2H0 777 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CTAGE8P0CG41 777 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 ARHGAP25P42331 645 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CUL4BQ13620 913 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CTAGE6Q86UF2 777 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CTAGE4Q8IX94 777 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 SPATA20Q8TB22 786 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 TMEM87BQ96K49 555 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 CHP1Q99653 195 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 MAPK8IP1Q9UQF2 711 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 SYNRGQ9UMZ2 1314 aa14.29□□□□□ -0.12
CLCNKA-204ENST00000464764 SRGAP2O75044 1071 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 GPTP24298 496 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 SGMS1Q86VZ5 419 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 PAGE5Q96GU1 130 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 ARMT1Q9H993 441 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 PPP1R3GB7ZBB8 358 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 ERLIN1O75477 346 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 PRDM1O75626 825 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 IFNAR1P17181 557 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 NOP2P46087 812 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 AKAP17AQ02040 695 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 GREM2Q9H772 168 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 FAM204AQ9H8W3 233 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 GUCA1BQ9UMX6 200 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 RILPL1Q5EBL4 403 aa14.28□□□□□ -0.12
CLCNKA-204ENST00000464764 TMEM94Q12767 1356 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 RTN1Q16799 776 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 CDKAL1Q5VV42 579 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 IQUBQ8NA54 791 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 STRN4Q9NRL3 753 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 TAB2Q9NYJ8 693 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 VPS54Q9P1Q0 977 aa14.27□□□□□ -0.12
CLCNKA-204ENST00000464764 RIPOR2Q9Y4F9 1068 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms