RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.77
HPS4-208ENST00000464362 SLC39A14Q15043 492 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 ANKRD13CQ8N6S4 541 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 NAA15Q9BXJ9 866 aaKnown RBP10.21□□□□□ -0.77
HPS4-208ENST00000464362 GOLPH3LQ9H4A5 285 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 C6orf50Q9HD87 102 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 AK9Q5TCS8 1911 aa10.21□□□□□ -0.77
HPS4-208ENST00000464362 HSF2BPO75031 334 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 PPARAQ07869 468 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 MICALL1Q8N3F8 863 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 NELFBQ8WX92 580 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 SAMSN1Q9NSI8 373 aaKnown RBP10.21□□□□□ -0.78
HPS4-208ENST00000464362 ERBB3P21860 1342 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 RNF17Q9BXT8 1623 aaKnown RBP10.21□□□□□ -0.78
HPS4-208ENST00000464362 CCNT1O60563 726 aaKnown RBP10.21□□□□□ -0.78
HPS4-208ENST00000464362 KIF20AO95235 890 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 RAPGEF1Q13905 1077 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.78
HPS4-208ENST00000464362 SEPT7Q16181 437 aaKnown RBP10.21□□□□□ -0.78
HPS4-208ENST00000464362 EPC1Q9H2F5 836 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 GLI2P10070 1586 aa10.21□□□□□ -0.78
HPS4-208ENST00000464362 NEO1Q92859 1461 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 ENC1O14682 589 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 TUBB4AP04350 444 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 HDXQ7Z353 690 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 E9PCH4 1651 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 UNC13BO14795 1591 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 GNPATO15228 680 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 CYP27B1O15528 508 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 PDE8BO95263 885 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 HIBADHP31937 336 aaKnown RBP10.2□□□□□ -0.78
HPS4-208ENST00000464362 DCAF17Q5H9S7 520 aaPredicted RBP10.2□□□□□ -0.78
HPS4-208ENST00000464362 TPTE2Q6XPS3 522 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 TMOD2Q9NZR1 351 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
HPS4-208ENST00000464362 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 ZMYND10O75800 440 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 PTGDRQ13258 359 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 NELFCDQ8IXH7 590 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 TMEM87AQ8NBN3 555 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 RRP36Q96EU6 259 aaKnown RBP10.2□□□□□ -0.78
HPS4-208ENST00000464362 CSRNP2Q9H175 543 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 ZSWIM5Q9P217 1185 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 ATP10DQ9P241 1426 aa10.2□□□□□ -0.78
HPS4-208ENST00000464362 TBCAO75347 108 aaKnown RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 FBXO38Q6PIJ6 1188 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 ZBTB38Q8NAP3 1195 aaPredicted RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 RGS22Q8NE09 1264 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 ZMYM6O95789 1325 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 A0A0G2JLW4 131 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 TMEM110-MUSTN1A8MSY1 372 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 CASP14P31944 242 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 NCBP1Q09161 790 aaKnown RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 INF2Q27J81 1249 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 UTP14CQ5TAP6 766 aaKnown RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 STOX1Q6ZVD7 989 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 TEX11Q8IYF3 940 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 PKD2L1Q9P0L9 805 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 ARID4AP29374 1257 aaPredicted RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 HPDP32754 393 aaPredicted RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 DDIT3P35638 169 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 GABPB1Q06547 395 aaPredicted RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
HPS4-208ENST00000464362 JAKMIP2Q96AA8 810 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 MED14O60244 1454 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 GOLGA6L7A0A1B0GV03 622 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 A0A1W2PQ27 194 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 A0A1W2PQ64 194 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 CYP26C1Q6V0L0 522 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 CUL5Q93034 780 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 TRIM31Q9BZY9 425 aa10.19□□□□□ -0.78
HPS4-208ENST00000464362 DYNLL1P63167 89 aaKnown RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 MAP2K1Q02750 393 aaPredicted RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 TGFBRAP1Q8WUH2 860 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 EPSTI1Q96J88 318 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 KCNF1Q9H3M0 494 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 PCDHB6Q9Y5E3 794 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 SPHKAPQ2M3C7 1700 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 RPAP1Q9BWH6 1393 aaPredicted RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 GNA11P29992 359 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 GYS2P54840 703 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 SCARF1Q14162 830 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■■■ 76
HPS4-208ENST00000464362 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 DENND2AQ9ULE3 1009 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 TTF2Q9UNY4 1162 aaKnown RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 PCCAP05165 728 aaPredicted RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 PARP1P09874 1014 aaKnown RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 TMTC1Q8IUR5 882 aa10.18□□□□□ -0.78
HPS4-208ENST00000464362 RBM28Q9NW13 759 aaKnown RBP10.18□□□□□ -0.78
HPS4-208ENST00000464362 ZBTB21Q9ULJ3 1066 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms