RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TSNAXIP1Q2TAA8 658 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 MEI1Q5TIA1 1274 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 LETMD1Q6P1Q0 360 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 NPAS4Q8IUM7 802 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 MFSD4AQ8N468 514 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 FAM168AQ92567 244 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 NOC4LQ9BVI4 516 aaKnown RBP7.63□□□□□ -1.19
ITGB1-208ENST00000464001 LMCD1Q9NZU5 365 aa7.63□□□□□ -1.19
ITGB1-208ENST00000464001 ZNF865P0CJ78 1059 aaPredicted RBP7.62□□□□□ -1.19
ITGB1-208ENST00000464001 CYP7A1P22680 504 aa7.62□□□□□ -1.19
ITGB1-208ENST00000464001 ST13P50502 369 aaKnown RBP7.62□□□□□ -1.19
ITGB1-208ENST00000464001 PDE4BQ07343 736 aa7.62□□□□□ -1.19
ITGB1-208ENST00000464001 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
ITGB1-208ENST00000464001 COX4I2Q96KJ9 171 aa7.62□□□□□ -1.19
ITGB1-208ENST00000464001 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 PGRP06401 933 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 TFE3P19532 575 aaPredicted RBP7.61□□□□□ -1.19
ITGB1-208ENST00000464001 DNAJC14Q6Y2X3 702 aaPredicted RBP7.61□□□□□ -1.19
ITGB1-208ENST00000464001 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 FLAD1Q8NFF5 587 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 HSPA12BQ96MM6 686 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 PRDM7Q9NQW5 492 aa7.61□□□□□ -1.19
ITGB1-208ENST00000464001 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 PRR33A8MZF0 331 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 RPL6Q02878 288 aaKnown RBP7.6□□□□□ -1.19
ITGB1-208ENST00000464001 CDKAL1Q5VV42 579 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 SLC6A19Q695T7 634 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 MRPL41Q8IXM3 137 aaKnown RBP7.6□□□□□ -1.19
ITGB1-208ENST00000464001 RIN3Q8TB24 985 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 JARID2Q92833 1246 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-208ENST00000464001 SEMA3GQ9NS98 782 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 TJP2Q9UDY2 1190 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 CAPN6Q9Y6Q1 641 aa7.6□□□□□ -1.19
ITGB1-208ENST00000464001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-208ENST00000464001 CBX7O95931 251 aa7.59□□□□□ -1.19
ITGB1-208ENST00000464001 ITGAEP38570 1179 aa7.59□□□□□ -1.19
ITGB1-208ENST00000464001 KIR3DL1P43629 444 aa7.59□□□□□ -1.19
ITGB1-208ENST00000464001 TLR6Q9Y2C9 796 aa7.59□□□□□ -1.19
ITGB1-208ENST00000464001 C8AP07357 584 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 THAP5Q7Z6K1 395 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 CDH24Q86UP0 819 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
ITGB1-208ENST00000464001 PHC3Q8NDX5 983 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 CARS2Q9HA77 564 aaKnown RBP7.58□□□□□ -1.2
ITGB1-208ENST00000464001 ATP13A1Q9HD20 1204 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 ST14Q9Y5Y6 855 aa7.58□□□□□ -1.2
ITGB1-208ENST00000464001 H3BS24 57 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 CTSHP09668 335 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 ERCC3P19447 782 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 ETV3P41162 512 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 AFMP43652 599 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
ITGB1-208ENST00000464001 FAM161BQ96MY7 647 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 CTNND2Q9UQB3 1225 aa7.57□□□□□ -1.2
ITGB1-208ENST00000464001 SORBS3O60504 671 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-208ENST00000464001 BPNT1O95861 308 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 ZSWIM9Q86XI8 627 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 RELL1Q8IUW5 271 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 DPH2Q9BQC3 489 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-208ENST00000464001 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
ITGB1-208ENST00000464001 LMNB2Q03252 620 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 FZD5Q13467 585 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
ITGB1-208ENST00000464001 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-208ENST00000464001 ZSWIM5Q9P217 1185 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 VTI1BQ9UEU0 232 aa7.55□□□□□ -1.2
ITGB1-208ENST00000464001 PLCG1P19174 1290 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 TNK2Q07912 1038 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 CAMK2GQ13555 558 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-208ENST00000464001 PWP1Q13610 501 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 ZNF648Q5T619 568 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-208ENST00000464001 KRTAP9-9Q9BYP9 154 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 KRTAP9-4Q9BYQ2 154 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
ITGB1-208ENST00000464001 CILPO75339 1184 aa7.53□□□□□ -1.2
ITGB1-208ENST00000464001 PF4P02776 101 aa7.53□□□□□ -1.2
ITGB1-208ENST00000464001 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
ITGB1-208ENST00000464001 BNC2Q6ZN30 1099 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-208ENST00000464001 GATAD2BQ8WXI9 593 aa7.53□□□□□ -1.2
ITGB1-208ENST00000464001 RSRP1Q9BUV0 290 aa7.53□□□□□ -1.2
ITGB1-208ENST00000464001 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-208ENST00000464001 GDNFP39905 211 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 YARSP54577 528 aaKnown RBP7.52□□□□□ -1.21
ITGB1-208ENST00000464001 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 KSR1Q8IVT5 923 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 FAM13CQ8NE31 585 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
ITGB1-208ENST00000464001 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms