RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TMOD4Q9NZQ9 345 aa21.23■□□□□ 0.99
HMGN1-209ENST00000463631 MYO5AQ9Y4I1 1855 aaKnown RBP21.23■□□□□ 0.99
HMGN1-209ENST00000463631 HERVK_113P62684 666 aa21.22■□□□□ 0.99
HMGN1-209ENST00000463631 JAG1P78504 1218 aa21.22■□□□□ 0.99
HMGN1-209ENST00000463631 ADGRA1Q86SQ6 560 aa21.22■□□□□ 0.99
HMGN1-209ENST00000463631 FOXP4Q8IVH2 680 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-209ENST00000463631 ZNF512BQ96KM6 892 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-209ENST00000463631 A0A0C4DFX4 3053 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 MAPK4P31152 587 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 POLA2Q14181 598 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 GPR153Q6NV75 609 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 TRMT44Q8IYL2 757 aaKnown RBP21.21■□□□□ 0.99
HMGN1-209ENST00000463631 C7orf61Q8IZ16 206 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 GPRC5AQ8NFJ5 357 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 GTF3C2Q8WUA4 911 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-209ENST00000463631 P2RX7Q99572 595 aaKnown RBP21.21■□□□□ 0.99
HMGN1-209ENST00000463631 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 TXNRD2Q9NNW7 524 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 ZBTB21Q9ULJ3 1066 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
HMGN1-209ENST00000463631 USP17L10C9JJH3 530 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-209ENST00000463631 PRKAR2AP13861 404 aaKnown RBP21.2■□□□□ 0.98
HMGN1-209ENST00000463631 CCDC158Q5M9N0 1113 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 TTC39AQ5SRH9 613 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 MAPKAPK5Q8IW41 473 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-209ENST00000463631 TGFBRAP1Q8WUH2 860 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 USP6NLQ92738 828 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 LRCH3Q96II8 777 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 C11orf49Q9H6J7 331 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 SNRKQ9NRH2 765 aa21.2■□□□□ 0.98
HMGN1-209ENST00000463631 SSH3Q8TE77 659 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 DBNDD2Q9BQY9 259 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 TRIM34Q9BYJ4 488 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 TNNQ9UQP3 1299 aa21.19■□□□□ 0.98
HMGN1-209ENST00000463631 MYH1P12882 1939 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 CYP2B6P20813 491 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 ERVK-9P63128 1117 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 ERVK-24P63145 666 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-209ENST00000463631 FRMPD3Q5JV73 1810 aa21.18■□□□□ 0.98
HMGN1-209ENST00000463631 GDF11O95390 407 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 HLA-DOAP06340 250 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 COL6A1P12109 1028 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-209ENST00000463631 CERS3Q8IU89 383 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 C12orf42Q96LP6 360 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 ZMYND8Q9ULU4 1186 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-209ENST00000463631 PFASO15067 1338 aa21.17■□□□□ 0.98
HMGN1-209ENST00000463631 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 PEX10O60683 326 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 LRIT3Q3SXY7 679 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 MORN1Q5T089 497 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-209ENST00000463631 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 APBA2Q99767 749 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 PORCNQ9H237 461 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 EMILIN3Q9NT22 766 aa21.16■□□□□ 0.98
HMGN1-209ENST00000463631 BCAR3O75815 825 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 RGS2P41220 211 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 USP17L2Q6R6M4 530 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 SLC17A8Q8NDX2 589 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 EHD4Q9H223 541 aa21.15■□□□□ 0.98
HMGN1-209ENST00000463631 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
HMGN1-209ENST00000463631 MAGEA10P43363 369 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 ZAP70P43403 619 aa21.14■□□□□ 0.97
HMGN1-209ENST00000463631 CACNB2Q08289 660 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 TATDN1Q6P1N9 297 aa21.14■□□□□ 0.97
HMGN1-209ENST00000463631 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.97
HMGN1-209ENST00000463631 DBNLQ9UJU6 430 aaKnown RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 NOP58Q9Y2X3 529 aaKnown RBP21.14■□□□□ 0.97
HMGN1-209ENST00000463631 ATP8B2P98198 1209 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 Q3C1V9 767 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 LHX8Q68G74 356 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 PLEKHH3Q7Z736 793 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 TDHQ8IZJ6 230 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 SAP30BPQ9UHR5 308 aaKnown RBP21.13■□□□□ 0.97
HMGN1-209ENST00000463631 RABGAP1Q9Y3P9 1069 aa21.13■□□□□ 0.97
HMGN1-209ENST00000463631 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
HMGN1-209ENST00000463631 GH2P01242 217 aa21.12■□□□□ 0.97
HMGN1-209ENST00000463631 SYN1P17600 705 aa21.12■□□□□ 0.97
HMGN1-209ENST00000463631 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
HMGN1-209ENST00000463631 CCAR1Q8IX12 1150 aaKnown RBP21.12■□□□□ 0.97
HMGN1-209ENST00000463631 PAGR1Q9BTK6 254 aa21.12■□□□□ 0.97
HMGN1-209ENST00000463631 CYP7A1P22680 504 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 DYNLL1P63167 89 aaKnown RBP21.11■□□□□ 0.97
HMGN1-209ENST00000463631 CCNA1P78396 465 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 CCL14Q16627 93 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 LBX2Q6XYB7 198 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
HMGN1-209ENST00000463631 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms