RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 GJD2Q9UKL4 321 aa18.75■□□□□ 0.59
CMSS1-202ENST00000463526 HMGCRP04035 888 aa18.74■□□□□ 0.59
CMSS1-202ENST00000463526 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
CMSS1-202ENST00000463526 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
CMSS1-202ENST00000463526 CRISPLD2Q9H0B8 497 aa18.74■□□□□ 0.59
CMSS1-202ENST00000463526 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
CMSS1-202ENST00000463526 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
CMSS1-202ENST00000463526 HLA-DOAP06340 250 aa18.73■□□□□ 0.59
CMSS1-202ENST00000463526 NECAB2Q7Z6G3 386 aa18.73■□□□□ 0.59
CMSS1-202ENST00000463526 MIGA1Q8NAN2 632 aa18.73■□□□□ 0.59
CMSS1-202ENST00000463526 DBNLQ9UJU6 430 aaKnown RBP18.73■□□□□ 0.59
CMSS1-202ENST00000463526 NDUFB9Q9Y6M9 179 aa18.73■□□□□ 0.59
CMSS1-202ENST00000463526 C19orf81C9J6K1 198 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 HERVK_113P62684 666 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 GPRC5AQ8NFJ5 357 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 TXNRD2Q9NNW7 524 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
CMSS1-202ENST00000463526 MORF4L1Q9UBU8 362 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 STAP2Q9UGK3 403 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 RPTORQ8N122 1335 aa18.72■□□□□ 0.59
CMSS1-202ENST00000463526 HOXA7P31268 230 aaPredicted RBP18.71■□□□□ 0.59
CMSS1-202ENST00000463526 USP5P45974 858 aa18.71■□□□□ 0.59
CMSS1-202ENST00000463526 CCAR1Q8IX12 1150 aaKnown RBP18.71■□□□□ 0.59
CMSS1-202ENST00000463526 TRIB2Q92519 343 aa18.71■□□□□ 0.59
CMSS1-202ENST00000463526 EAF2Q96CJ1 260 aaPredicted RBP18.71■□□□□ 0.59
CMSS1-202ENST00000463526 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
CMSS1-202ENST00000463526 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
CMSS1-202ENST00000463526 PRO3102Q9H379 93 aa18.71■□□□□ 0.59
CMSS1-202ENST00000463526 ATAD5Q96QE3 1844 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 GH2P01242 217 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 RLBP1P12271 317 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 CAPN2P17655 700 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 ZYXQ15942 572 aaKnown RBP18.7■□□□□ 0.58
CMSS1-202ENST00000463526 Q3C1V9 767 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
CMSS1-202ENST00000463526 C7orf61Q8IZ16 206 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 MAGEB6Q8N7X4 407 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 NUDT12Q9BQG2 462 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
CMSS1-202ENST00000463526 ZMYND8Q9ULU4 1186 aaPredicted RBP18.7■□□□□ 0.58
CMSS1-202ENST00000463526 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
CMSS1-202ENST00000463526 LOC285556D6RIA3 1793 aa18.69■□□□□ 0.58
CMSS1-202ENST00000463526 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
CMSS1-202ENST00000463526 ANTXR1Q9H6X2 564 aa18.69■□□□□ 0.58
CMSS1-202ENST00000463526 EMILIN3Q9NT22 766 aa18.69■□□□□ 0.58
CMSS1-202ENST00000463526 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
CMSS1-202ENST00000463526 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 USP17L2Q6R6M4 530 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 FEZ1Q99689 392 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 NBPF3Q9H094 633 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 PORCNQ9H237 461 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
CMSS1-202ENST00000463526 GINM1Q9NU53 330 aa18.68■□□□□ 0.58
CMSS1-202ENST00000463526 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 ERVK-24P63145 666 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 AACSQ86V21 672 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 ANKLE1Q8NAG6 615 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
CMSS1-202ENST00000463526 RANBP2P49792 3224 aaKnown RBP18.66■□□□□ 0.58
CMSS1-202ENST00000463526 SOX1O00570 391 aaPredicted RBP18.66■□□□□ 0.58
CMSS1-202ENST00000463526 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
CMSS1-202ENST00000463526 SYN1P17600 705 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 MAPK4P31152 587 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 MNX1P50219 401 aaPredicted RBP18.66■□□□□ 0.58
CMSS1-202ENST00000463526 CCL14Q16627 93 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 GPR142Q7Z601 462 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 PLEKHH3Q7Z736 793 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 C11orf49Q9H6J7 331 aa18.66■□□□□ 0.58
CMSS1-202ENST00000463526 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 WDR78Q5VTH9 848 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 POTEEQ6S8J3 1075 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 LRCH3Q96II8 777 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 SERPINB13Q9UIV8 391 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 OGDHLQ9ULD0 1010 aa18.65■□□□□ 0.58
CMSS1-202ENST00000463526 MYO5AQ9Y4I1 1855 aaKnown RBP18.65■□□□□ 0.58
CMSS1-202ENST00000463526 MAST2Q6P0Q8 1798 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 IGSF3O75054 1194 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
CMSS1-202ENST00000463526 RGS2P41220 211 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 CACNB2Q08289 660 aaPredicted RBP18.64■□□□□ 0.57
CMSS1-202ENST00000463526 CERKLQ49MI3 558 aaPredicted RBP18.64■□□□□ 0.57
CMSS1-202ENST00000463526 MAP3K21Q5TCX8 1036 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 ACER1Q8TDN7 264 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 GTF3C2Q8WUA4 911 aaPredicted RBP18.64■□□□□ 0.57
CMSS1-202ENST00000463526 IL1RAPL2Q9NP60 686 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
CMSS1-202ENST00000463526 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms