RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ZBTB21Q9ULJ3 1066 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 AGTPBP1Q9UPW5 1226 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 ZFYP08048 801 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-202ENST00000463440 PLCD1P51178 756 aa19.55■□□□□ 0.72
COL1A1-202ENST00000463440 C17orf99Q6UX52 265 aa19.55■□□□□ 0.72
COL1A1-202ENST00000463440 PI4K2BQ8TCG2 481 aa19.55■□□□□ 0.72
COL1A1-202ENST00000463440 OTUD7AQ8TE49 926 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-202ENST00000463440 CPA4Q9UI42 421 aa19.55■□□□□ 0.72
COL1A1-202ENST00000463440 DDX60LQ5H9U9 1706 aaKnown RBP19.54■□□□□ 0.72
COL1A1-202ENST00000463440 PRKAB2O43741 272 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 CHGBP05060 677 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 CYP2C8P10632 490 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 HMGCS2P54868 508 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 JAG1P78504 1218 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 LACTBP83111 547 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-202ENST00000463440 CERKLQ49MI3 558 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-202ENST00000463440 AMOTL1Q8IY63 956 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 PUS7LQ9H0K6 701 aaKnown RBP19.54■□□□□ 0.72
COL1A1-202ENST00000463440 PNMA3Q9UL41 463 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 SLC4A4Q9Y6R1 1079 aa19.54■□□□□ 0.72
COL1A1-202ENST00000463440 ADGRA2Q96PE1 1338 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
COL1A1-202ENST00000463440 GH2P01242 217 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 BACE1P56817 501 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 PABPC4Q13310 644 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL1A1-202ENST00000463440 SH3D19Q5HYK7 790 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 APPBP2Q92624 585 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 TMOD4Q9NZQ9 345 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 PTPN22Q9Y2R2 807 aa19.53■□□□□ 0.72
COL1A1-202ENST00000463440 C19orf81C9J6K1 198 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 USP17L10C9JJH3 530 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 SHMT1P34896 483 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 GABPAQ06546 454 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 MTMR2Q13614 643 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 SHROOM1Q2M3G4 852 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-202ENST00000463440 TREML2Q5T2D2 321 aa19.52■□□□□ 0.72
COL1A1-202ENST00000463440 SMCR8Q8TEV9 937 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-202ENST00000463440 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
COL1A1-202ENST00000463440 GNRH1P01148 92 aa19.51■□□□□ 0.71
COL1A1-202ENST00000463440 CAP1Q01518 475 aa19.51■□□□□ 0.71
COL1A1-202ENST00000463440 FSD1Q9BTV5 496 aa19.51■□□□□ 0.71
COL1A1-202ENST00000463440 SWAP70Q9UH65 585 aa19.51■□□□□ 0.71
COL1A1-202ENST00000463440 LOC285556D6RIA3 1793 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 CYP2D6P10635 497 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 BCRP11274 1271 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 OSBPP22059 807 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 RAB3GAP1Q15042 981 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 OSBP2Q969R2 916 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 STRBPQ96SI9 672 aaKnown RBP19.5■□□□□ 0.71
COL1A1-202ENST00000463440 ARHGAP39Q9C0H5 1083 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 STAP2Q9UGK3 403 aa19.5■□□□□ 0.71
COL1A1-202ENST00000463440 USP17L12C9JPN9 530 aa19.49■□□□□ 0.71
COL1A1-202ENST00000463440 USP17L21D6R901 530 aa19.49■□□□□ 0.71
COL1A1-202ENST00000463440 PSMC4P43686 418 aa19.49■□□□□ 0.71
COL1A1-202ENST00000463440 PDE1AP54750 535 aa19.49■□□□□ 0.71
COL1A1-202ENST00000463440 C12orf60Q5U649 245 aa19.49■□□□□ 0.71
COL1A1-202ENST00000463440 BAZ2AQ9UIF9 1905 aaKnown RBP19.49■□□□□ 0.71
COL1A1-202ENST00000463440 FMNL1O95466 1100 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-202ENST00000463440 GNAT2P19087 354 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 HOXD10P28358 340 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 PRMT2P55345 433 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 EVX2Q03828 476 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 B4GALNT3Q6L9W6 998 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 USP17L2Q6R6M4 530 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 FEZ1Q99689 392 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
COL1A1-202ENST00000463440 MPHOSPH10O00566 681 aaKnown RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 GPAA1O43292 621 aa19.47■□□□□ 0.71
COL1A1-202ENST00000463440 ECM2O94769 699 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 IGHDP01880 384 aa19.47■□□□□ 0.71
COL1A1-202ENST00000463440 GCLCP48506 637 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 IRX3P78415 501 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 GIMAP6Q6P9H5 292 aa19.47■□□□□ 0.71
COL1A1-202ENST00000463440 CTR9Q6PD62 1173 aa19.47■□□□□ 0.71
COL1A1-202ENST00000463440 DYNLL2Q96FJ2 89 aa19.47■□□□□ 0.71
COL1A1-202ENST00000463440 ASCC2Q9H1I8 757 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 ARPP21Q9UBL0 812 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-202ENST00000463440 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 HOXA7P31268 230 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-202ENST00000463440 RGS19P49795 217 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 USP14P54578 494 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 FCGRTP55899 365 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 SOX10P56693 466 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 EVI5LQ96CN4 794 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 TRIM47Q96LD4 638 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
COL1A1-202ENST00000463440 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 M0R2C6 588 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 CDK8P49336 464 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 NUCB1Q02818 461 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 SEPT2Q15019 361 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 FAM110CQ1W6H9 321 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 SBK1Q52WX2 424 aa19.45■□□□□ 0.7
COL1A1-202ENST00000463440 TMEM179Q6ZVK1 233 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms