RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 LOC285556D6RIA3 1793 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 BTBD19C9JJ37 291 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 FKTNO75072 461 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 SLFNL1Q499Z3 407 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 ZNF280CQ8ND82 737 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 CASP8AP2Q9UKL3 1982 aa15.68■□□□□ 0.1
R3HDM1-213ENST00000463230 GPAA1O43292 621 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 MOGSQ13724 837 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 TNS4Q8IZW8 715 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 PROCA1Q8NCQ7 364 aaPredicted RBP15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 ZBTB21Q9ULJ3 1066 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 BAZ2AQ9UIF9 1905 aaKnown RBP15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 PRKAB2O43741 272 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 SLURP2P0DP57 97 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 PLCD1P51178 756 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 CRHR2Q13324 411 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 SH3D19Q5HYK7 790 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 HELLSQ9NRZ9 838 aa15.67■□□□□ 0.1
R3HDM1-213ENST00000463230 SHMT1P34896 483 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 CERKLQ49MI3 558 aaPredicted RBP15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 MYH8P13535 1937 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 GSG1L2A8MUP6 293 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 C19orf81C9J6K1 198 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 CHGBP05060 677 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 ZNF296Q8WUU4 475 aaPredicted RBP15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 PARK7Q99497 189 aaKnown RBP15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 CABP5Q9NP86 173 aa15.66■□□□□ 0.1
R3HDM1-213ENST00000463230 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 M0R2C6 588 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 PABPC4Q13310 644 aaKnown RBP eCLIP15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 PKN2Q16513 984 aaKnown RBP15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 CTU1Q7Z7A3 348 aaKnown RBP15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 ERO1AQ96HE7 468 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 CCDC17Q96LX7 622 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 AGTPBP1Q9UPW5 1226 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
R3HDM1-213ENST00000463230 USP17L12C9JPN9 530 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 USP17L21D6R901 530 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 HIP1O00291 1037 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 PDHXO00330 501 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 TLR2O60603 784 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 GPAT2Q6NUI2 795 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 CTR9Q6PD62 1173 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 C16orf86Q6ZW13 317 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 TRIM75PA6NK02 468 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 SPP2Q13103 211 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 ARHGEF6Q15052 776 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 PNMA3Q9UL41 463 aa15.64■□□□□ 0.09
R3HDM1-213ENST00000463230 ADGRA2Q96PE1 1338 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 TRIM6-TRIM34B2RNG4 842 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 GDF11O95390 407 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 GH2P01242 217 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 GADL1Q6ZQY3 521 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 R3HDMLQ9H3Y0 253 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 CYP2D6P10635 497 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 BACE1P56817 501 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 TMEM179Q6ZVK1 233 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 ZNF287Q9HBT7 754 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
R3HDM1-213ENST00000463230 USP17L10C9JJH3 530 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 JAG1P78504 1218 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 SP3Q02447 781 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 TDO2P48775 406 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 USP14P54578 494 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 USP17L2Q6R6M4 530 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 C12orf42Q96LP6 360 aa15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 EPB41L4AQ9HCS5 686 aaPredicted RBP15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
R3HDM1-213ENST00000463230 PDE4AP27815 886 aa15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 CDK8P49336 464 aa15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 ALX1Q15699 326 aa15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 CCDC84Q86UT8 332 aaPredicted RBP15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 RILPL2Q969X0 211 aa15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 KIAA1683Q9H0B3 1180 aa15.61■□□□□ 0.09
R3HDM1-213ENST00000463230 ZMYM6O95789 1325 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 APPP05067 770 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 DGKZQ13574 1117 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 MTMR2Q13614 643 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 C17orf99Q6UX52 265 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 NAPBQ9H115 298 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 GNRH1P01148 92 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 SDSP20132 328 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 OSBPP22059 807 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 HOXA7P31268 230 aaPredicted RBP15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 HMGCS2P54868 508 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 TTC22Q5TAA0 569 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms