RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SLC4A8Q2Y0W8 1093 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 TREML2Q5T2D2 321 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 DNAJC2Q99543 621 aaKnown RBP8.82□□□□□ -1
PTPRF-210ENST00000463041 HAUS7Q99871 368 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 CRNKL1Q9BZJ0 848 aaKnown RBP8.82□□□□□ -1
PTPRF-210ENST00000463041 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.82□□□□□ -1
PTPRF-210ENST00000463041 BOLA2Q9H3K6 86 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 DNAJC18Q9H819 358 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 PAG1Q9NWQ8 432 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.82□□□□□ -1
PTPRF-210ENST00000463041 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 SIPA1L1O43166 1804 aa8.82□□□□□ -1
PTPRF-210ENST00000463041 ZNF532Q9HCE3 1301 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
PTPRF-210ENST00000463041 TCRBV5S4A2TA0A5A2 114 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 EN2P19622 333 aaPredicted RBP8.81□□□□□ -1
PTPRF-210ENST00000463041 JAG1P78504 1218 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 FAM110CQ1W6H9 321 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 CERKLQ49MI3 558 aaPredicted RBP8.81□□□□□ -1
PTPRF-210ENST00000463041 ZSCAN25Q6NSZ9 544 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 ANKRD13CQ8N6S4 541 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 SH3TC2Q8TF17 1288 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 COA7Q96BR5 231 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 BCL11AQ9H165 835 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 ASCC2Q9H1I8 757 aaPredicted RBP8.81□□□□□ -1
PTPRF-210ENST00000463041 CABP5Q9NP86 173 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 ZBTB21Q9ULJ3 1066 aa8.81□□□□□ -1
PTPRF-210ENST00000463041 MYPNQ86TC9 1320 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 ZSWIM8A7E2V4 1837 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 TNPO2O14787 897 aaKnown RBP8.8□□□□□ -1
PTPRF-210ENST00000463041 ECM2O94769 699 aaPredicted RBP8.8□□□□□ -1
PTPRF-210ENST00000463041 GDF11O95390 407 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 GH2P01242 217 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 CAPN2P17655 700 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 ADD2P35612 726 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 PLCD1P51178 756 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 UBXN2AP68543 259 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 IRF5Q13568 498 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 MTMR2Q13614 643 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 UBE3CQ15386 1083 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 ABCB5Q2M3G0 1257 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 USP17L2Q6R6M4 530 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 SLAIN1Q8ND83 568 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 EDC3Q96F86 508 aaKnown RBP8.8□□□□□ -1
PTPRF-210ENST00000463041 P2RX7Q99572 595 aaKnown RBP8.8□□□□□ -1
PTPRF-210ENST00000463041 ATP8A2Q9NTI2 1148 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 ECHDC1Q9NTX5 307 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 MCM9Q9NXL9 1143 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 BIN2Q9UBW5 565 aaPredicted RBP8.8□□□□□ -1
PTPRF-210ENST00000463041 GABRQQ9UN88 632 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 MYH7P12883 1935 aa8.8□□□□□ -1
PTPRF-210ENST00000463041 LOC285556D6RIA3 1793 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
PTPRF-210ENST00000463041 ADCY3O60266 1144 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 FLT3LGP49771 235 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 USP14P54578 494 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 IRX3P78415 501 aaPredicted RBP8.79□□□□□ -1
PTPRF-210ENST00000463041 PRKCZQ05513 592 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 GABPAQ06546 454 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 PRPF38BQ5VTL8 546 aaKnown RBP8.79□□□□□ -1
PTPRF-210ENST00000463041 GTF3C2Q8WUA4 911 aaPredicted RBP8.79□□□□□ -1
PTPRF-210ENST00000463041 GPATCH3Q96I76 525 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 DCP1AQ9NPI6 582 aaPredicted RBP8.79□□□□□ -1
PTPRF-210ENST00000463041 EMILIN3Q9NT22 766 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 MORF4L1Q9UBU8 362 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 CEP290O15078 2479 aa8.79□□□□□ -1
PTPRF-210ENST00000463041 BAZ2AQ9UIF9 1905 aaKnown RBP8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L15C9J2P7 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L11C9JVI0 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L18D6R9N7 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L22D6RA61 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L19D6RCP7 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L20D6RJB6 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 GJB1P08034 283 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 SHMT1P34896 483 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 HERVK_113P62684 666 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 USP17L24Q0WX57 530 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 RAB3GAP1Q15042 981 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 MTFR1Q15390 333 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 SHROOM1Q2M3G4 852 aaPredicted RBP8.78□□□□□ -1
PTPRF-210ENST00000463041 LCORLQ8N3X6 602 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 GPRC5AQ8NFJ5 357 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 SDR42E1Q8WUS8 393 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 C12orf42Q96LP6 360 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 KIAA1683Q9H0B3 1180 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 ARMT1Q9H993 441 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 SWAP70Q9UH65 585 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 GJD2Q9UKL4 321 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
PTPRF-210ENST00000463041 MBD4O95243 580 aa8.77□□□□□ -1.01
PTPRF-210ENST00000463041 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
PTPRF-210ENST00000463041 CCL5P13501 91 aa8.77□□□□□ -1.01
PTPRF-210ENST00000463041 GJA8P48165 433 aa8.77□□□□□ -1.01
PTPRF-210ENST00000463041 LRRFIP1Q32MZ4 808 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms