RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZMYM1	Q5SVZ6	1142 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	DYNLL2	Q96FJ2	89 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	MS4A4A	Q96JQ5	239 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	DNAJC18	Q9H819	358 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	DIAPH3	Q9NSV4	1193 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	SAGE1	Q9NXZ1	904 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	PTPRF	P10586	1907 aa		11.52	□□□□□ -0.57
PSMD4-208	ENST00000462970	USP17L5	A8MUK1	530 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	ALDH1A1	P00352	501 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	GH2	P01242	217 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	GNAT2	P19087	354 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	NMI	Q13287	307 aa	Predicted RBP	11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	TAF1C	Q15572	869 aa	Predicted RBP	11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	CERKL	Q49MI3	558 aa	Predicted RBP	11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	SLC44A5	Q8NCS7	719 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	FAM227B	Q96M60	508 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	PTPN18	Q99952	460 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	EHD4	Q9H223	541 aa		11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970		U3KPZ7	1027 aa	Predicted RBP	11.51	□□□□□ -0.57
PSMD4-208	ENST00000462970	CCDC85C	A6NKD9	419 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	GSG1L2	A8MUP6	293 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	BTBD19	C9JJ37	291 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	ASNS	P08243	561 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	JAG1	P78504	1218 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	SPP2	Q13103	211 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	RAB3GAP1	Q15042	981 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	ABCB5	Q2M3G0	1257 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	TTC22	Q5TAA0	569 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	CTR9	Q6PD62	1173 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	FAM43A	Q8N2R8	423 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	FEZ1	Q99689	392 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	NACAP1	Q9BZK3	213 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	NAPB	Q9H115	298 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	R3HDML	Q9H3Y0	253 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	OSBPL3	Q9H4L5	887 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	AS3MT	Q9HBK9	375 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	CABP5	Q9NP86	173 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZBTB21	Q9ULJ3	1066 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970	AFG3L2	Q9Y4W6	797 aa		11.5	□□□□□ -0.57
PSMD4-208	ENST00000462970		A0A0D9SFI3	127 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	SMIM22	K7EJ46	135 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	CXCL11	O14625	94 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	ECM2	O94769	699 aa	Predicted RBP	11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	SDS	P20132	328 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	SHMT1	P34896	483 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	CRHR2	Q13324	411 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZYX	Q15942	572 aa	Known RBP	11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	C12orf60	Q5U649	245 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZNF280C	Q8ND82	737 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	HELLS	Q9NRZ9	838 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970	KCNH4	Q9UQ05	1017 aa		11.49	□□□□□ -0.57
PSMD4-208	ENST00000462970		A0A0G2JLL6	359 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	TESPA1	A2RU30	521 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	PATL2	C9JE40	543 aa	Known RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	GPR25	O00155	361 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	PDHX	O00330	501 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	CDK8	P49336	464 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	HMGCS2	P54868	508 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	MTMR2	Q13614	643 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	MCMDC2	Q4G0Z9	681 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	TATDN1	Q6P1N9	297 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	CWC27	Q6UX04	472 aa	Known RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	FASTKD5	Q7L8L6	764 aa	Known RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	METTL16	Q86W50	562 aa	Known RBP	11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	SKAP1	Q86WV1	359 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	IFNL3	Q8IZI9	196 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	MKNK2	Q9HBH9	465 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZFYVE28	Q9HCC9	887 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	TMOD4	Q9NZQ9	345 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	SWAP70	Q9UH65	585 aa		11.48	□□□□□ -0.57
PSMD4-208	ENST00000462970	HIP1	O00291	1037 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	FKTN	O75072	461 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	GSPT1	P15170	499 aa	Known RBP	11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	ATP2B2	Q01814	1243 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	GABPA	Q06546	454 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	DGKZ	Q13574	1117 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	SEPT2	Q15019	361 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	VPS53	Q5VIR6	699 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	GIMAP6	Q6P9H5	292 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	C16orf86	Q6ZW13	317 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	ANKRD23	Q86SG2	305 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	MCOLN1	Q9GZU1	580 aa		11.47	□□□□□ -0.57
PSMD4-208	ENST00000462970	CCDC171	Q6TFL3	1326 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	USP17L10	C9JJH3	530 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	RAD21	O60216	631 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	PRDM1	O75626	825 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	SLC3A2	P08195	630 aa	Known RBP	11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	AKR1B1	P15121	316 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	MFAP1	P55081	439 aa	Known RBP	11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	MOGS	Q13724	837 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	SBK1	Q52WX2	424 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	GPAT2	Q6NUI2	795 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	CLEC10A	Q8IUN9	316 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms