RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 LOC102724428A0A0B4J2F2 783 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 TRPA1O75762 1119 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 PSAPP07602 524 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 MAPTP10636 758 aaKnown RBP4.05□□□□□ -1.76
SMC4-203ENST00000462668 SIK1P57059 783 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 ERVK-21P61565 698 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 RALBP1Q15311 655 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 CXorf57Q6NSI4 855 aaKnown RBP4.05□□□□□ -1.76
SMC4-203ENST00000462668 LRFN4Q6PJG9 635 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 POLMQ9NP87 494 aaPredicted RBP4.05□□□□□ -1.76
SMC4-203ENST00000462668 DDX21Q9NR30 783 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC4-203ENST00000462668 SLC35F4A4IF30 521 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 ADARB2-AS1A8MUL3 147 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 GABRDO14764 452 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 BNIP3LO60238 219 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 RAPGEF3O95398 923 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 SCG5P05408 212 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 RAB27AP51159 221 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 SUMO1P63165 101 aaKnown RBP4.05□□□□□ -1.76
SMC4-203ENST00000462668 VHLLQ6RSH7 139 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 PODNQ7Z5L7 613 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 DGKHQ86XP1 1220 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 WNT8BQ93098 351 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 AIDAQ96BJ3 306 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 C1orf159Q96HA4 380 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 CCDC180Q9P1Z9 1646 aa4.05□□□□□ -1.76
SMC4-203ENST00000462668 IRS4O14654 1257 aaPredicted RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 GSTP1P09211 210 aaKnown RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 COL6A1P12109 1028 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 GUCY2FP51841 1108 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 MYO1HQ8N1T3 1032 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 CRTAC1Q9NQ79 661 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 PGAP2Q9UHJ9 254 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 MCM4P33991 863 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 PMS1P54277 932 aaKnown RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 AHI1Q8N157 1196 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 CRIPAKQ8N1N5 446 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 SMARCC1Q92922 1105 aaPredicted RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 RUBCNLQ9H714 662 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 ANO9A1A5B4 782 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 SOBPA7XYQ1 873 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 ZNF862O60290 1169 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 BRINP1O60477 761 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 BPNT1O95861 308 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 ASLP04424 464 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 MYL1P05976 194 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 NFKB1P19838 968 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 ZNF280AP59817 542 aaPredicted RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 FAM209AQ5JX71 171 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 MRPL14Q6P1L8 145 aaKnown RBP4.04□□□□□ -1.76
SMC4-203ENST00000462668 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 C14orf80Q86SX3 495 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 SLFN12Q8IYM2 578 aa4.04□□□□□ -1.76
SMC4-203ENST00000462668 TRAV20A0A0B4J274 112 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 EIF4EBP3O60516 100 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 NTF4P34130 210 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SLC7A5Q01650 507 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SPEM2Q0P670 501 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 DHX8Q14562 1220 aaKnown RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 MPRIPQ6WCQ1 1025 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 TRBV23-1A0A0A0MS06 115 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 BAG6P46379 1132 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 CYP4F3Q08477 520 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 ACBD5Q5T8D3 534 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 TMEM192Q8IY95 271 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SLC7A14Q8TBB6 771 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 JARID2Q92833 1246 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 AARSD1Q9BTE6 412 aaKnown RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 TNKSO95271 1327 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 TTLL8A6PVC2 850 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 YBX3P16989 372 aaKnown RBP eCLIP4.03□□□□□ -1.761e-12■■■■□ 23.5
SMC4-203ENST00000462668 SYDE2Q5VT97 1194 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 CREB3L3Q68CJ9 461 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 TRIM46Q7Z4K8 759 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 NCAPG2Q86XI2 1143 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 CHPFQ8IZ52 775 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 GSX1Q9H4S2 264 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 SLC5A4Q9NY91 659 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 MARK1Q9P0L2 795 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 PTPN22Q9Y2R2 807 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 ANKRD34BA5PLL1 514 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 CCDC85CA6NKD9 419 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 CBFA2T2O43439 604 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SIN3BO75182 1162 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 DDAH1O94760 285 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 TYRP1P17643 537 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 HDAC1Q13547 482 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 NTRK3Q16288 839 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SPATS2Q86XZ4 545 aaKnown RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 TRIM22Q8IYM9 498 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 IFNL3Q8IZI9 196 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 RUNDC1Q96C34 613 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SARGQ9BW04 601 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 SUCOQ9UBS9 1254 aaKnown RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 DACH1Q9UI36 760 aa4.03□□□□□ -1.76
SMC4-203ENST00000462668 GDF2Q9UK05 429 aaPredicted RBP4.03□□□□□ -1.76
SMC4-203ENST00000462668 SHOXO15266 292 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 ZEB2O60315 1214 aa4.02□□□□□ -1.77
SMC4-203ENST00000462668 PHKG2P15735 406 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms