RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
RPRD1B-203ENST00000462548 F13A1P00488 732 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 NTRK3Q16288 839 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 IDI2Q9BXS1 227 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 SIPA1L1O43166 1804 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 FOSBP53539 338 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 TCP10Q12799 353 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 IFIT1BQ5T764 474 aaKnown RBP17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
RPRD1B-203ENST00000462548 PDCP20941 246 aa17.54■□□□□ 0.4
RPRD1B-203ENST00000462548 CIAPIN1Q6FI81 312 aa17.54■□□□□ 0.4
RPRD1B-203ENST00000462548 SH3BP5LQ7L8J4 393 aa17.54■□□□□ 0.4
RPRD1B-203ENST00000462548 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
RPRD1B-203ENST00000462548 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 CPLX1O14810 134 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 MCTP1Q6DN14 999 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 AGBL3Q8NEM8 1001 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 DDTLA6NHG4 134 aaPredicted RBP17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 SYNE3Q6ZMZ3 975 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 PHKBQ93100 1093 aa17.53■□□□□ 0.4
RPRD1B-203ENST00000462548 TSPY3P0CV98 308 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 TSPY8P0CW00 308 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 FERMT3Q86UX7 667 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 UBE2Q2LH0YL09 131 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 TROAPQ12815 778 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 RTN1Q16799 776 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 FANCBQ8NB91 859 aa17.52■□□□□ 0.4
RPRD1B-203ENST00000462548 CMTR1Q8N1G2 835 aaKnown RBP17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 DNAJC18Q9H819 358 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 TCP11L1Q9NUJ3 509 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 HDAC9Q9UKV0 1011 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 SHMT1P34896 483 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 RCAN1P53805 252 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 ANKS1AQ92625 1134 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 GJB4Q9NTQ9 266 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 SERPINB13Q9UIV8 391 aa17.51■□□□□ 0.39
RPRD1B-203ENST00000462548 FZD9O00144 591 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 NT5C2P49902 561 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 OGFOD1Q8N543 542 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 TCHHQ07283 1943 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 CATIPQ7Z7H3 387 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 ZBED3Q96IU2 234 aaPredicted RBP17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
RPRD1B-203ENST00000462548 AKR1B1P15121 316 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 IFNAR1P17181 557 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 TNIP1Q15025 636 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 SYT17Q9BSW7 474 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 MYH8P13535 1937 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 UTRNP46939 3433 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 DDAH1O94760 285 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 ARHGAP27Q6ZUM4 889 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 MTMR14Q8NCE2 650 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 EHD4Q9H223 541 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 ZNF541Q9H0D2 1346 aa17.49■□□□□ 0.39
RPRD1B-203ENST00000462548 TCP10L2B9ZVM9 353 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 H3BQV1 296 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 ENTPD3O75355 529 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 CDKL5O76039 1030 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 EGFRP00533 1210 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 RESTQ13127 1097 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 CCDC82Q8N4S0 544 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 GDPD2Q9HCC8 539 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 LMBRD1Q9NUN5 540 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 PLEKHA8P1O95397 391 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 ZSCAN29Q8IWY8 852 aaPredicted RBP17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 TMEM47Q9BQJ4 181 aa17.48■□□□□ 0.39
RPRD1B-203ENST00000462548 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms