RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 CCZ1BP86790 482 aa13.83□□□□□ -0.2
TNRC6A-204ENST00000462400 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
TNRC6A-204ENST00000462400 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
TNRC6A-204ENST00000462400 CCAR2Q8N163 923 aaKnown RBP13.83□□□□□ -0.2
TNRC6A-204ENST00000462400 MRFAP1L1Q96HT8 127 aa13.83□□□□□ -0.2
TNRC6A-204ENST00000462400 CAPN2P17655 700 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 GUCY1B3Q02153 619 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 ERCC6LQ2NKX8 1250 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 SARM1Q6SZW1 724 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 MASTLQ96GX5 879 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 HPS5Q9UPZ3 1129 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 USP17L12C9JPN9 530 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 USP17L21D6R901 530 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 GTF2IP78347 998 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 WDR66Q8TBY9 1149 aa13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 PDS5AQ29RF7 1337 aaKnown RBP13.82□□□□□ -0.2
TNRC6A-204ENST00000462400 BECN2A8MW95 431 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 CAVIN2O95810 425 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 TULP2O00295 520 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 CYP2C19P33261 490 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 CTR9Q6PD62 1173 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 ZNF274Q96GC6 653 aaPredicted RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 ANGEL1Q9UNK9 670 aaKnown RBP13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 DUOX1Q9NRD9 1551 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 ZMYM6O95789 1325 aa13.81□□□□□ -0.2
TNRC6A-204ENST00000462400 A0A087WWV3 80 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 IL1R1P14778 569 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 BAG6P46379 1132 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 DCP1AQ9NPI6 582 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 MYH2Q9UKX2 1941 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 H0YIN7 160 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 ALDH1B1P30837 517 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 HNRNPH2P55795 449 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 FAM193AP78312 1265 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 OTUD7BQ6GQQ9 843 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 SMARCC2Q8TAQ2 1214 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 STAG1Q8WVM7 1258 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 DBNDD1Q9H9R9 158 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
TNRC6A-204ENST00000462400 H2AFXP16104 143 aaPredicted RBP13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 CREBRFQ8IUR6 639 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 FHOD1Q9Y613 1164 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 MAST2Q6P0Q8 1798 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 TIAM2Q8IVF5 1701 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 FDPSP14324 419 aaKnown RBP13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 CLCN6P51797 869 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 STX1AQ16623 288 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
TNRC6A-204ENST00000462400 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 H3BQV1 296 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 CDC27P30260 824 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 EVCP57679 992 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 USP5P45974 858 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 SYT10Q6XYQ8 523 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 KRT23Q9C075 422 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 PNMA6AP0CW24 399 aaPredicted RBP13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 BTDP43251 543 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
TNRC6A-204ENST00000462400 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms