RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TRIM6-TRIM34B2RNG4 842 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 ASNSP08243 561 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 GNAT2P19087 354 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 NOM1Q5C9Z4 860 aaKnown RBP19.02■□□□□ 0.64
ERCC3-206ENST00000462306 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 PRRT2Q7Z6L0 340 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-206ENST00000462306 DDRGK1Q96HY6 314 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 EPB41L4AQ9HCS5 686 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-206ENST00000462306 ZBTB21Q9ULJ3 1066 aa19.02■□□□□ 0.64
ERCC3-206ENST00000462306 TRIM75PA6NK02 468 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 GPR25O00155 361 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 CRHR2Q13324 411 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 CERKLQ49MI3 558 aaPredicted RBP19.01■□□□□ 0.63
ERCC3-206ENST00000462306 ANKRD23Q86SG2 305 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 DYNLL2Q96FJ2 89 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 ZCCHC17Q9NP64 241 aaKnown RBP19.01■□□□□ 0.63
ERCC3-206ENST00000462306 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 CASP8AP2Q9UKL3 1982 aa19.01■□□□□ 0.63
ERCC3-206ENST00000462306 PATL2C9JE40 543 aaKnown RBP19■□□□□ 0.63
ERCC3-206ENST00000462306 GH2P01242 217 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 SPP2Q13103 211 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 SBK1Q52WX2 424 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 GPAT2Q6NUI2 795 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 FAM227BQ96M60 508 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 WDR18Q9BV38 432 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 HELLSQ9NRZ9 838 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 ARPP21Q9UBL0 812 aaPredicted RBP19■□□□□ 0.63
ERCC3-206ENST00000462306 PTPRFP10586 1907 aa19■□□□□ 0.63
ERCC3-206ENST00000462306 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
ERCC3-206ENST00000462306 TAF1CQ15572 869 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-206ENST00000462306 CCDC129Q6ZRS4 1044 aa18.99■□□□□ 0.63
ERCC3-206ENST00000462306 FASTKD5Q7L8L6 764 aaKnown RBP18.99■□□□□ 0.63
ERCC3-206ENST00000462306 AMOTL1Q8IY63 956 aa18.99■□□□□ 0.63
ERCC3-206ENST00000462306 IFNL3Q8IZI9 196 aa18.99■□□□□ 0.63
ERCC3-206ENST00000462306 ZNF296Q8WUU4 475 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-206ENST00000462306 SWAP70Q9UH65 585 aa18.99■□□□□ 0.63
ERCC3-206ENST00000462306 FOXP2O15409 715 aa18.98■□□□□ 0.63
ERCC3-206ENST00000462306 NMIQ13287 307 aaPredicted RBP18.98■□□□□ 0.63
ERCC3-206ENST00000462306 ABCB5Q2M3G0 1257 aa18.98■□□□□ 0.63
ERCC3-206ENST00000462306 C16orf86Q6ZW13 317 aa18.98■□□□□ 0.63
ERCC3-206ENST00000462306 AS3MTQ9HBK9 375 aa18.98■□□□□ 0.63
ERCC3-206ENST00000462306 PDHXO00330 501 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 APPP05067 770 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 GSPT1P15170 499 aaKnown RBP18.97■□□□□ 0.63
ERCC3-206ENST00000462306 SDSP20132 328 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 GUCY1A2P33402 732 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 CDK8P49336 464 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 SH3D19Q5HYK7 790 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 GADL1Q6ZQY3 521 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 CENPQQ7L2Z9 268 aaPredicted RBP18.97■□□□□ 0.63
ERCC3-206ENST00000462306 ZFYVE28Q9HCC9 887 aa18.97■□□□□ 0.63
ERCC3-206ENST00000462306 FKTNO75072 461 aa18.96■□□□□ 0.63
ERCC3-206ENST00000462306 TDO2P48775 406 aa18.96■□□□□ 0.63
ERCC3-206ENST00000462306 HMGCS2P54868 508 aa18.96■□□□□ 0.63
ERCC3-206ENST00000462306 BACE1P56817 501 aa18.96■□□□□ 0.63
ERCC3-206ENST00000462306 PROCA1Q8NCQ7 364 aaPredicted RBP18.96■□□□□ 0.63
ERCC3-206ENST00000462306 CABP5Q9NP86 173 aa18.96■□□□□ 0.63
ERCC3-206ENST00000462306 ROBO3Q96MS0 1386 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 TLR2O60603 784 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
ERCC3-206ENST00000462306 DGKZQ13574 1117 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 MTMR2Q13614 643 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 RAB3GAP1Q15042 981 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 TNS4Q8IZW8 715 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 NACAP1Q9BZK3 213 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 AGTPBP1Q9UPW5 1226 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 SLC45A1Q9Y2W3 748 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 ADGRA2Q96PE1 1338 aa18.95■□□□□ 0.62
ERCC3-206ENST00000462306 LOC285556D6RIA3 1793 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 MINDY4BA8MYZ0 360 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 C19orf81C9J6K1 198 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 USP17L10C9JJH3 530 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 AKR1B1P15121 316 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 SEPT2Q15019 361 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 TREML2Q5T2D2 321 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 ZNF589Q86UQ0 364 aaPredicted RBP18.94■□□□□ 0.62
ERCC3-206ENST00000462306 CCDC17Q96LX7 622 aa18.94■□□□□ 0.62
ERCC3-206ENST00000462306 MPHOSPH10O00566 681 aaKnown RBP18.93■□□□□ 0.62
ERCC3-206ENST00000462306 NEFLP07196 543 aa18.93■□□□□ 0.62
ERCC3-206ENST00000462306 CYP2C8P10632 490 aa18.93■□□□□ 0.62
ERCC3-206ENST00000462306 TMEM179Q6ZVK1 233 aa18.93■□□□□ 0.62
ERCC3-206ENST00000462306 ACER1Q8TDN7 264 aa18.93■□□□□ 0.62
ERCC3-206ENST00000462306 NAPBQ9H115 298 aa18.93■□□□□ 0.62
ERCC3-206ENST00000462306 HIP1O00291 1037 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 SP3Q02447 781 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 ALX1Q15699 326 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 C17orf99Q6UX52 265 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
ERCC3-206ENST00000462306 EMILIN3Q9NT22 766 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
ERCC3-206ENST00000462306 HSPD1P10809 573 aaKnown RBP18.91■□□□□ 0.62
ERCC3-206ENST00000462306 RASA1P20936 1047 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 PPARAQ07869 468 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms