RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 SYNPO2Q9UMS6 1093 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 ANGEL1Q9UNK9 670 aaKnown RBP12.56□□□□□ -0.4
RTF1-202ENST00000462276 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
RTF1-202ENST00000462276 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 UNCXA6NJT0 531 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
RTF1-202ENST00000462276 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
RTF1-202ENST00000462276 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
RTF1-202ENST00000462276 PRDM1O75626 825 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 RCAN1P53805 252 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 EVCP57679 992 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 TMEM179Q6ZVK1 233 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 SGMS1Q86VZ5 419 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 KANSL2Q9H9L4 492 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 INCENPQ9NQS7 918 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 TACC3Q9Y6A5 838 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
RTF1-202ENST00000462276 ASNSP08243 561 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 NOVP48745 357 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 ANTXR2P58335 489 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
RTF1-202ENST00000462276 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
RTF1-202ENST00000462276 SYNE3Q6ZMZ3 975 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 STK11IPQ8N1F8 1099 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
RTF1-202ENST00000462276 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
RTF1-202ENST00000462276 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 SMIM22K7EJ46 135 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
RTF1-202ENST00000462276 CAP2P40123 477 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 AK2P54819 239 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 FKBP1BP68106 108 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 WTAPQ15007 396 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 Q6ZUG5 572 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 ZNF274Q96GC6 653 aaPredicted RBP12.53□□□□□ -0.4
RTF1-202ENST00000462276 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
RTF1-202ENST00000462276 NMRK2Q9NPI5 230 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 SCN4AP35499 1836 aa12.53□□□□□ -0.4
RTF1-202ENST00000462276 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 DHX16O60231 1041 aaKnown RBP12.52□□□□□ -0.41
RTF1-202ENST00000462276 TTLL1O95922 423 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 CALM1P0DP23 149 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 CALM2P0DP24 149 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 CALM3P0DP25 149 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 EVX2Q03828 476 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 SEC23AQ15436 765 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
RTF1-202ENST00000462276 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
RTF1-202ENST00000462276 BRF1Q92994 677 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 KLRG1Q96E93 195 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 NYAP2Q9P242 653 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.41
RTF1-202ENST00000462276 TNKSO95271 1327 aa12.52□□□□□ -0.41
RTF1-202ENST00000462276 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
RTF1-202ENST00000462276 MPHOSPH10O00566 681 aaKnown RBP12.51□□□□□ -0.41
RTF1-202ENST00000462276 TOP1P11387 765 aaKnown RBP12.51□□□□□ -0.41
RTF1-202ENST00000462276 CPA1P15085 419 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 AKR1B1P15121 316 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
RTF1-202ENST00000462276 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 TOB2Q14106 344 aaPredicted RBP12.51□□□□□ -0.41
RTF1-202ENST00000462276 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 ARMC9Q7Z3E5 817 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 CATIPQ7Z7H3 387 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 MKL1Q969V6 931 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
RTF1-202ENST00000462276 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 IL17RBQ9NRM6 502 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
RTF1-202ENST00000462276 ADM5C9JUS6 153 aa12.5□□□□□ -0.41
RTF1-202ENST00000462276 DDAH1O94760 285 aa12.5□□□□□ -0.41
RTF1-202ENST00000462276 GH2P01242 217 aa12.5□□□□□ -0.41
RTF1-202ENST00000462276 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
RTF1-202ENST00000462276 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms