RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 OSBPP22059 807 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 ADD2P35612 726 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 SRRDQ9UH36 339 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 NAV1Q8NEY1 1877 aa16.6■□□□□ 0.25
PCOLCE-203ENST00000462260 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 MGAMO43451 1857 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 POTEFA5A3E0 1075 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 HOXD10P28358 340 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 PLCD1P51178 756 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 BACE1P56817 501 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 MTMR2Q13614 643 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
PCOLCE-203ENST00000462260 MYH7P12883 1935 aa16.58■□□□□ 0.25
PCOLCE-203ENST00000462260 MKI67P46013 3256 aaKnown RBP16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 C19orf81C9J6K1 198 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 FMNL1O95466 1100 aaPredicted RBP16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 GH2P01242 217 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 POLR3DP05423 398 aaPredicted RBP16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 FCGRTP55899 365 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 GABPAQ06546 454 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.24
PCOLCE-203ENST00000462260 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 MBD4O95243 580 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 CHGBP05060 677 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 SHMT1P34896 483 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 UBE3CQ15386 1083 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 FAM110CQ1W6H9 321 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 SH3TC2Q8TF17 1288 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 MCM9Q9NXL9 1143 aa16.57■□□□□ 0.24
PCOLCE-203ENST00000462260 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
PCOLCE-203ENST00000462260 GCLCP48506 637 aaPredicted RBP16.56■□□□□ 0.24
PCOLCE-203ENST00000462260 EVX2Q03828 476 aa16.56■□□□□ 0.24
PCOLCE-203ENST00000462260 CERKLQ49MI3 558 aaPredicted RBP16.56■□□□□ 0.24
PCOLCE-203ENST00000462260 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
PCOLCE-203ENST00000462260 PRKCZQ05513 592 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
PCOLCE-203ENST00000462260 DOCK3Q8IZD9 2030 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 PRKAB2O43741 272 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 GABRQQ9UN88 632 aa16.54■□□□□ 0.24
PCOLCE-203ENST00000462260 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 CYP2D6P10635 497 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 GRK4P32298 578 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 P2RX7Q99572 595 aaKnown RBP16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
PCOLCE-203ENST00000462260 TTC41PQ6P2S7 1318 aa16.52■□□□□ 0.24
PCOLCE-203ENST00000462260 TNPO2O14787 897 aaKnown RBP16.52■□□□□ 0.24
PCOLCE-203ENST00000462260 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.24
PCOLCE-203ENST00000462260 MORF4L1Q9UBU8 362 aa16.52■□□□□ 0.24
PCOLCE-203ENST00000462260 MYCP01106 439 aaPredicted RBP16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 FLT3LGP49771 235 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 USP14P54578 494 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 HERVK_113P62684 666 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 IRF5Q13568 498 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 MTFR1Q15390 333 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 C12orf60Q5U649 245 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 SLAIN1Q8ND83 568 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 COA7Q96BR5 231 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 DYNLL2Q96FJ2 89 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 SLC4A4Q9Y6R1 1079 aa16.51■□□□□ 0.23
PCOLCE-203ENST00000462260 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
PCOLCE-203ENST00000462260 USP17L21D6R901 530 aa16.5■□□□□ 0.23
PCOLCE-203ENST00000462260 SEPT2Q15019 361 aa16.5■□□□□ 0.23
PCOLCE-203ENST00000462260 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
PCOLCE-203ENST00000462260 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms