RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 MKL1Q969V6 931 aa6.16□□□□□ -1.42
FN1-215ENST00000461974 MEGF10Q96KG7 1140 aa6.16□□□□□ -1.42
FN1-215ENST00000461974 CSADQ9Y600 493 aa6.16□□□□□ -1.42
FN1-215ENST00000461974 DNAJA2O60884 412 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 CST3P01034 146 aaPredicted RBP6.15□□□□□ -1.42
FN1-215ENST00000461974 SEZ6L2Q6UXD5 910 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 CDC37L1Q7L3B6 337 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 LRP10Q7Z4F1 713 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 CD163Q86VB7 1156 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 FAM20CQ8IXL6 584 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 ARMC10Q8N2F6 343 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 FAM169BQ8N8A8 192 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 ATG4CQ96DT6 458 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 SEMA6CQ9H3T2 930 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 FBRSQ9HAH7 460 aa6.15□□□□□ -1.42
FN1-215ENST00000461974 SMAD7O15105 426 aaKnown RBP6.14□□□□□ -1.43
FN1-215ENST00000461974 GSK3AP49840 483 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 NKG7Q16617 165 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 FBXW10Q5XX13 1052 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 CDPF1Q6NVV7 123 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 ANKS3Q6ZW76 656 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 UTP4Q969X6 686 aaKnown RBP6.14□□□□□ -1.43
FN1-215ENST00000461974 ANAPC16Q96DE5 110 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 DNAJC2Q99543 621 aaKnown RBP6.14□□□□□ -1.43
FN1-215ENST00000461974 FOXQ1Q9C009 403 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 SIRPGQ9P1W8 387 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
FN1-215ENST00000461974 MRVI1Q9Y6F6 885 aa6.14□□□□□ -1.43
FN1-215ENST00000461974 C1QTNF9BB2RNN3 333 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 RGS13O14921 159 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 DHX15O43143 795 aaKnown RBP6.13□□□□□ -1.43
FN1-215ENST00000461974 ACRP10323 421 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 MAP4P27816 1152 aaKnown RBP6.13□□□□□ -1.43
FN1-215ENST00000461974 USP11P51784 963 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 LNPKQ9C0E8 428 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 ANTXR1Q9H6X2 564 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 ACTR10Q9NZ32 417 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
FN1-215ENST00000461974 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
FN1-215ENST00000461974 BMP3P12645 472 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 RAG1P15918 1043 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 SGO2Q562F6 1265 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 PRAMEF13Q5VWM6 474 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 ARMCX6Q7L4S7 300 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 DPH6Q7L8W6 267 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 UBE3DQ7Z6J8 389 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 TTC6Q86TZ1 520 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 CLEC10AQ8IUN9 316 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.12□□□□□ -1.43
FN1-215ENST00000461974 COX4I2Q96KJ9 171 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 TRIM55Q9BYV6 548 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 OSBPL2Q9H1P3 480 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 PHAXQ9H814 394 aaKnown RBP6.12□□□□□ -1.43
FN1-215ENST00000461974 KLHL3Q9UH77 587 aa6.12□□□□□ -1.43
FN1-215ENST00000461974 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
FN1-215ENST00000461974 A0A1W2PQH9 124 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 CHURC1-FNTBB4DL54 471 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 RAB6AP20340 208 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 RASSF7Q02833 373 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 NFE2L2Q16236 605 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 FXNQ16595 210 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 ARSHQ5FYA8 562 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 ZNF746Q6NUN9 644 aaPredicted RBP6.11□□□□□ -1.43
FN1-215ENST00000461974 NOP9Q86U38 636 aaKnown RBP6.11□□□□□ -1.43
FN1-215ENST00000461974 FBLIM1Q8WUP2 373 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 HNRNPLLQ8WVV9 542 aaKnown RBP6.11□□□□□ -1.43
FN1-215ENST00000461974 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
FN1-215ENST00000461974 SLC9A7Q96T83 725 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 FAM83CQ9BQN1 747 aa6.11□□□□□ -1.43
FN1-215ENST00000461974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.11□□□□□ -1.43
FN1-215ENST00000461974 FAM95CA0A1B0GW59 222 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
FN1-215ENST00000461974 NFICP08651 508 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 GATA4P43694 442 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 DDR2Q16832 855 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 BBS9Q3SYG4 887 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 UNC5AQ6ZN44 842 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 RUFY4Q6ZNE9 571 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 GIMAP7Q8NHV1 300 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 ZNF669Q96BR6 464 aaPredicted RBP6.1□□□□□ -1.43
FN1-215ENST00000461974 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 CCDC113Q9H0I3 377 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 SSU72Q9NP77 194 aaKnown RBP6.1□□□□□ -1.43
FN1-215ENST00000461974 C1GALT1Q9NS00 363 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 DAGLAQ9Y4D2 1042 aa6.1□□□□□ -1.43
FN1-215ENST00000461974 COL17A1Q9UMD9 1497 aaPredicted RBP6.09□□□□□ -1.43
FN1-215ENST00000461974 UPK3BL1B0FP48 263 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 UPK3BL2E5RIL1 263 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 UBOX5O94941 541 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 RASA3Q14644 834 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 NCAPHQ15003 741 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 CPSF6Q16630 551 aaKnown RBP eCLIP6.09□□□□□ -1.43
FN1-215ENST00000461974 PAOXQ6QHF9 649 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 DNAJB8Q8NHS0 232 aa6.09□□□□□ -1.43
FN1-215ENST00000461974 PPP1R13LQ8WUF5 828 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms