RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 PEX10O60683 326 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 MAP4K4O95819 1239 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-202ENST00000461349 RFX5P48382 616 aaPredicted RBP15.8■□□□□ 0.12
C9orf78-202ENST00000461349 MAP2K5Q13163 448 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 C9orf50Q5SZB4 431 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 LPAR1Q92633 364 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 WDR18Q9BV38 432 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 PORCNQ9H237 461 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 DDX20Q9UHI6 824 aaKnown RBP15.8■□□□□ 0.12
C9orf78-202ENST00000461349 HERC5Q9UII4 1024 aaKnown RBP15.8■□□□□ 0.12
C9orf78-202ENST00000461349 MUC3AQ02505 3323 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 SIPA1L1O43166 1804 aa15.8■□□□□ 0.12
C9orf78-202ENST00000461349 PDS5AQ29RF7 1337 aaKnown RBP15.79■□□□□ 0.12
C9orf78-202ENST00000461349 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 ZBTB22O15209 634 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 CIAO1O76071 339 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 ASNSP08243 561 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 RHBDL3P58872 404 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 ERICH6Q7L0X2 663 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 EDC3Q96F86 508 aaKnown RBP15.79■□□□□ 0.12
C9orf78-202ENST00000461349 CDK5RAP2Q96SN8 1893 aa15.79■□□□□ 0.12
C9orf78-202ENST00000461349 LDHCP07864 332 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 CCNA1P78396 465 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 GSTO1P78417 241 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 MECOMQ03112 1051 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 RASGRF1Q13972 1273 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 Q3C1V9 767 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 USP44Q9H0E7 712 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
C9orf78-202ENST00000461349 USP17L10C9JJH3 530 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 KBTBD13C9JR72 458 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 IL15P40933 162 aaPredicted RBP15.77■□□□□ 0.12
C9orf78-202ENST00000461349 ATP2B2Q01814 1243 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
C9orf78-202ENST00000461349 WDR78Q5VTH9 848 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 ARRDC4Q8NCT1 418 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 BADQ92934 168 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
C9orf78-202ENST00000461349 PTPRCP08575 1304 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 PLA2G5P39877 138 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 SLC39A5Q6ZMH5 540 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 IVNS1ABPQ9Y6Y0 642 aa15.76■□□□□ 0.11
C9orf78-202ENST00000461349 SLC15A5A6NIM6 579 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 ADORA1P30542 326 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
C9orf78-202ENST00000461349 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 NOL10Q9BSC4 688 aaKnown RBP15.75■□□□□ 0.11
C9orf78-202ENST00000461349 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
C9orf78-202ENST00000461349 GINM1Q9NU53 330 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 FLRT1Q9NZU1 646 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
C9orf78-202ENST00000461349 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
C9orf78-202ENST00000461349 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
C9orf78-202ENST00000461349 RNPC3Q96LT9 517 aaKnown RBP15.74■□□□□ 0.11
C9orf78-202ENST00000461349 RAPGEFL1Q9UHV5 662 aa15.74■□□□□ 0.11
C9orf78-202ENST00000461349 NDUFB9Q9Y6M9 179 aa15.74■□□□□ 0.11
C9orf78-202ENST00000461349 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
C9orf78-202ENST00000461349 CYP2C19P33261 490 aa15.73■□□□□ 0.11
C9orf78-202ENST00000461349 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
C9orf78-202ENST00000461349 TRIM60Q495X7 471 aa15.73■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L2Q6R6M4 530 aa15.73■□□□□ 0.11
C9orf78-202ENST00000461349 PDLIM7Q9NR12 457 aa15.73■□□□□ 0.11
C9orf78-202ENST00000461349 RAI14Q9P0K7 980 aa15.73■□□□□ 0.11
C9orf78-202ENST00000461349 HOXC6P09630 235 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 PTPREP23469 700 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
C9orf78-202ENST00000461349 USP38Q8NB14 1042 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 ZNF384Q8TF68 577 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 NSUN4Q96CB9 384 aaKnown RBP15.72■□□□□ 0.11
C9orf78-202ENST00000461349 ZBTB21Q9ULJ3 1066 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 MYH1P12882 1939 aa15.72■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 GDF11O95390 407 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 UBTFL1P0CB47 393 aaPredicted RBP15.71■□□□□ 0.11
C9orf78-202ENST00000461349 CYBAP13498 195 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 TIMM10P62072 90 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 GRIN2CQ14957 1233 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 SNX17Q15036 470 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 FOXP4Q8IVH2 680 aaPredicted RBP15.71■□□□□ 0.11
C9orf78-202ENST00000461349 ATXN2LQ8WWM7 1075 aaKnown RBP15.71■□□□□ 0.11
C9orf78-202ENST00000461349 EMILIN3Q9NT22 766 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 AKAP2Q9Y2D5 859 aa15.71■□□□□ 0.11
C9orf78-202ENST00000461349 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
C9orf78-202ENST00000461349 TRIM43BA6NCK2 446 aa15.7■□□□□ 0.1
C9orf78-202ENST00000461349 JAG1P78504 1218 aa15.7■□□□□ 0.1
C9orf78-202ENST00000461349 GRB14Q14449 540 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms