RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 RAET1EQ8TD07 263 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 AGTPBP1Q9UPW5 1226 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 DOCK1Q14185 1865 aa15.94■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TCRBV5S4A2TA0A5A2 114 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 OSBPP22059 807 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 EVI5LQ96CN4 794 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CRNKL1Q9BZJ0 848 aaKnown RBP15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ARHGAP39Q9C0H5 1083 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TMOD4Q9NZQ9 345 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
RAB11FIP3-207ENST00000461009 RNF113AO15541 343 aaKnown RBP15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SLURP2P0DP57 97 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ZNF333Q96JL9 665 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 RIOK1Q9BRS2 568 aaKnown RBP15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SRRDQ9UH36 339 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 SAP30BPQ9UHR5 308 aaKnown RBP15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 ADGRA2Q96PE1 1338 aa15.92■□□□□ 0.14
RAB11FIP3-207ENST00000461009 TRIM6-TRIM34B2RNG4 842 aa15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 BCRP11274 1271 aa15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 METTL16Q86W50 562 aaKnown RBP15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 WDR18Q9BV38 432 aa15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 MYPNQ86TC9 1320 aa15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
RAB11FIP3-207ENST00000461009 C19orf81C9J6K1 198 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 GCLCP48506 637 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 HMGCS2P54868 508 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CAP1Q01518 475 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CENPQQ7L2Z9 268 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 APPBP2Q92624 585 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 DDRGK1Q96HY6 314 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 BIN2Q9UBW5 565 aaPredicted RBP15.9■□□□□ 0.14
RAB11FIP3-207ENST00000461009 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 POTEFA5A3E0 1075 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 BACE1P56817 501 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 UBXN2AP68543 259 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SH3D19Q5HYK7 790 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 COA7Q96BR5 231 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 MYH1P12882 1939 aa15.89■□□□□ 0.13
RAB11FIP3-207ENST00000461009 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 MBD4O95243 580 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 MYCP01106 439 aaPredicted RBP15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 GRK4P32298 578 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 IRX3P78415 501 aaPredicted RBP15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 MTMR2Q13614 643 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 TREML2Q5T2D2 321 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 LCORLQ8N3X6 602 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ANKRD13CQ8N6S4 541 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 RILPL2Q969X0 211 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 EHD4Q9H223 541 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ARMT1Q9H993 441 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
RAB11FIP3-207ENST00000461009 GDF11O95390 407 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 EN2P19622 333 aaPredicted RBP15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 RRP1BQ14684 758 aaKnown RBP15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 FAM110CQ1W6H9 321 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SLFNL1Q499Z3 407 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 PRPF38BQ5VTL8 546 aaKnown RBP15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 AMOTL1Q8IY63 956 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SLAIN1Q8ND83 568 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 PUS7LQ9H0K6 701 aaKnown RBP15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 PHIPQ8WWQ0 1821 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ATAD5Q96QE3 1844 aa15.87■□□□□ 0.13
RAB11FIP3-207ENST00000461009 GNAT2P19087 354 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 CTGFP29279 349 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 PRKCZQ05513 592 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 USP17L2Q6R6M4 530 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 FEZ1Q99689 392 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ASCC2Q9H1I8 757 aaPredicted RBP15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 MCM9Q9NXL9 1143 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
RAB11FIP3-207ENST00000461009 GH2P01242 217 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 PDE4AP27815 886 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ABCB5Q2M3G0 1257 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 ZMYM1Q5SVZ6 1142 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 TATDN1Q6P1N9 297 aa15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 CCAR1Q8IX12 1150 aaKnown RBP15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 GTF3C2Q8WUA4 911 aaPredicted RBP15.85■□□□□ 0.13
RAB11FIP3-207ENST00000461009 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms