RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 PPP2R3AQ06190 1150 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 CRACR2BQ8N4Y2 399 aaPredicted RBP13.81□□□□□ -0.2
GCOM1-203ENST00000460962 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 CCDC34Q96HJ3 373 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 SLC4A4Q9Y6R1 1079 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 PLCD1P51178 756 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 CABP5Q9NP86 173 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 ACTN4O43707 911 aaKnown RBP13.81□□□□□ -0.2
GCOM1-203ENST00000460962 SEC31AO94979 1220 aaKnown RBP13.81□□□□□ -0.2
GCOM1-203ENST00000460962 GNAT2P19087 354 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 CSRNP2Q9H175 543 aa13.81□□□□□ -0.2
GCOM1-203ENST00000460962 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 LCORLQ8N3X6 602 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
GCOM1-203ENST00000460962 OXER1Q8TDS5 423 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 EPC1Q9H2F5 836 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 MRFAP1Q9Y605 127 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 STRCP1A6NGW2 1772 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 SNAP23O00161 211 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
GCOM1-203ENST00000460962 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
GCOM1-203ENST00000460962 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
GCOM1-203ENST00000460962 AKR1B15C9JRZ8 316 aaPredicted RBP13.79□□□□□ -0.2
GCOM1-203ENST00000460962 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
GCOM1-203ENST00000460962 NR1I3Q14994 352 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 DHX58Q96C10 678 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 MED15Q96RN5 788 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 RNF41Q9H4P4 317 aaPredicted RBP13.79□□□□□ -0.2
GCOM1-203ENST00000460962 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 A0A1B0GTH6 734 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 ATP8B1O43520 1251 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 CCDC175P0C221 793 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
GCOM1-203ENST00000460962 XBP1P17861 261 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 SPATA20Q8TB22 786 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 KIFC2Q96AC6 838 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 SEC31BQ9NQW1 1179 aa13.79□□□□□ -0.2
GCOM1-203ENST00000460962 TIAM2Q8IVF5 1701 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 RCAN1P53805 252 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 MIGA1Q8NAN2 632 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 POLR3GO15318 223 aaPredicted RBP13.78□□□□□ -0.2
GCOM1-203ENST00000460962 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
GCOM1-203ENST00000460962 AFMP43652 599 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 MTF1Q14872 753 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
GCOM1-203ENST00000460962 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
GCOM1-203ENST00000460962 PANX2Q96RD6 677 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
GCOM1-203ENST00000460962 SOWAHDA6NJG2 315 aa13.77□□□□□ -0.2
GCOM1-203ENST00000460962 RSRC2Q7L4I2 434 aaKnown RBP13.77□□□□□ -0.2
GCOM1-203ENST00000460962 GOLGA1Q92805 767 aa13.77□□□□□ -0.2
GCOM1-203ENST00000460962 MRPL44Q9H9J2 332 aaKnown RBP13.77□□□□□ -0.2
GCOM1-203ENST00000460962 ARFGAP3Q9NP61 516 aa13.77□□□□□ -0.2
GCOM1-203ENST00000460962 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.2
GCOM1-203ENST00000460962 LRP2BPQ9P2M1 347 aa13.77□□□□□ -0.2
GCOM1-203ENST00000460962 TEX33O43247 280 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 CYP2C19P33261 490 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 STX17P56962 302 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 IGSF22Q8N9C0 903 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 RABGGTAQ92696 567 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
GCOM1-203ENST00000460962 LZTFL1Q9NQ48 299 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 PPARAQ07869 468 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
GCOM1-203ENST00000460962 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 EPSTI1Q96J88 318 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 ANKRD36CQ5JPF3 1778 aa13.77□□□□□ -0.21
GCOM1-203ENST00000460962 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 MINDY4BA8MYZ0 360 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 BCAMP50895 628 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
GCOM1-203ENST00000460962 PARD6BQ9BYG5 372 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 TNKSO95271 1327 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 RTL9Q8NET4 1388 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 ERVV-1B6SEH8 477 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 KRT2P35908 639 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 RBL2Q08999 1139 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 ESR2Q92731 530 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
GCOM1-203ENST00000460962 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms