RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LDHBP07195 334 aaKnown RBP16.36■□□□□ 0.21
ERCC3-205ENST00000460485 PLCG2P16885 1265 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 ADD1P35611 737 aaKnown RBP16.36■□□□□ 0.21
ERCC3-205ENST00000460485 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 PDE4BQ07343 736 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
ERCC3-205ENST00000460485 RTN1Q16799 776 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-205ENST00000460485 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 TNMDQ9H2S6 317 aa16.36■□□□□ 0.21
ERCC3-205ENST00000460485 PRKAB2O43741 272 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 XBP1P17861 261 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 PPP4CP60510 307 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 KIF23Q02241 960 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-205ENST00000460485 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERCC3-205ENST00000460485 NTRK3Q16288 839 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 STYK1Q6J9G0 422 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 FUCA2Q9BTY2 467 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-205ENST00000460485 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-205ENST00000460485 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
ERCC3-205ENST00000460485 IL1R1P14778 569 aa16.34■□□□□ 0.21
ERCC3-205ENST00000460485 FAM160A1Q05DH4 1040 aa16.34■□□□□ 0.21
ERCC3-205ENST00000460485 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
ERCC3-205ENST00000460485 FAM177A1Q8N128 213 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-205ENST00000460485 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-205ENST00000460485 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
ERCC3-205ENST00000460485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
ERCC3-205ENST00000460485 MORC2Q9Y6X9 1032 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-205ENST00000460485 MYH1P12882 1939 aa16.33■□□□□ 0.21
ERCC3-205ENST00000460485 KINO60870 393 aaKnown RBP16.33■□□□□ 0.2
ERCC3-205ENST00000460485 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
ERCC3-205ENST00000460485 STK38Q15208 465 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 SEC23AQ15436 765 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 CATIPQ7Z7H3 387 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 ZNF654Q8IZM8 581 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 USP28Q96RU2 1077 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.2
ERCC3-205ENST00000460485 MAP3K14Q99558 947 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 BEGAINQ9BUH8 593 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 DACT1Q9NYF0 836 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
ERCC3-205ENST00000460485 TFIP11Q9UBB9 837 aaKnown RBP16.33■□□□□ 0.2
ERCC3-205ENST00000460485 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
ERCC3-205ENST00000460485 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 PPP6R2O75170 966 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 TNKSO95271 1327 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 SRGNP10124 158 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 MYH8P13535 1937 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.21e-7■□□□□ 8.7
ERCC3-205ENST00000460485 EPHX2P34913 555 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
ERCC3-205ENST00000460485 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 SDR42E1Q8WUS8 393 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 MRPS27Q92552 414 aaKnown RBP16.32■□□□□ 0.2
ERCC3-205ENST00000460485 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-205ENST00000460485 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
ERCC3-205ENST00000460485 COL11A2P13942 1736 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 MROH7-TTC4A0A0A0MT08 1334 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 FAM205AQ6ZU69 1335 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 LIG1P18858 919 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 CDC27P30260 824 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 ECE1P42892 770 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 ME1P48163 572 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 CHAF1AQ13111 956 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 IFIT1BQ5T764 474 aaKnown RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 KRT40Q6A162 431 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 SASS6Q6UVJ0 657 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 LINC00301Q8NCQ3 95 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 FOXP1Q9H334 677 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-205ENST00000460485 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
ERCC3-205ENST00000460485 ESPNB1AK53 854 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 SPTLC2O15270 562 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 UFL1O94874 794 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 NPR1P16066 1061 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 KLRK1P26718 216 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 PRDX5P30044 214 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
ERCC3-205ENST00000460485 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms