RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 PICK1Q9NRD5 415 aa13.04□□□□□ -0.32
SMNDC1-203ENST00000460483 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 PLCD1P51178 756 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 C8orf34Q49A92 452 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 ZFPM1Q8IX07 1006 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 STAG1Q8WVM7 1258 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 ROBO3Q96MS0 1386 aa13.03□□□□□ -0.32
SMNDC1-203ENST00000460483 ERICH2A1L162 156 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 HSPA4P34932 840 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 CDK8P49336 464 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 PTH1RQ03431 593 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 NECTIN1Q15223 517 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 MIGA2Q7L4E1 593 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 USP26Q9BXU7 913 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 SH2D4AQ9H788 454 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 AS3MTQ9HBK9 375 aa13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 ANGEL1Q9UNK9 670 aaKnown RBP13.02□□□□□ -0.33
SMNDC1-203ENST00000460483 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 ORC4O43929 436 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 GABPAQ06546 454 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 ABCB5Q2M3G0 1257 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 TATDN1Q6P1N9 297 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 TMEM179Q6ZVK1 233 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
SMNDC1-203ENST00000460483 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
SMNDC1-203ENST00000460483 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
SMNDC1-203ENST00000460483 SLC27A2O14975 620 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 CYP21A2P08686 494 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 FGRP09769 529 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 HAND2P61296 217 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 FGD1P98174 961 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
SMNDC1-203ENST00000460483 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 TMTC2Q8N394 836 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 SLC10A4Q96EP9 437 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 NEK1Q96PY6 1258 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 IL25Q9H293 177 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 ZNF112Q9UJU3 913 aa13□□□□□ -0.33
SMNDC1-203ENST00000460483 PASKQ96RG2 1323 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 TRAF5O00463 557 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 FOXP2O15409 715 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 MCM5P33992 734 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 CAP2P40123 477 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 PRAMEF18Q5VWM3 479 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 HHIPL1Q96JK4 782 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 TTC14Q96N46 770 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 SYNPO2Q9UMS6 1093 aa12.99□□□□□ -0.33
SMNDC1-203ENST00000460483 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 E7EWF7 191 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 CYP2D6P10635 497 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 SHMT1P34896 483 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 APLP1P51693 650 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 TFAP4Q01664 338 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 ERO1BQ86YB8 467 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 TMEM87BQ96K49 555 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 ARHGEF10LQ9HCE6 1279 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 TCP11L1Q9NUJ3 509 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
SMNDC1-203ENST00000460483 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 CYP2D7A0A087X1C5 515 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 ECE1P42892 770 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 HUNKP57058 714 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 PPATQ06203 517 aa12.97□□□□□ -0.33
SMNDC1-203ENST00000460483 PRKG1Q13976 671 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms