RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 CCDC8Q9H0W5 538 aaPredicted RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 PI4KBQ9UBF8 816 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 GJD2Q9UKL4 321 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 DNAH12Q6ZR08 3092 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 MYH7P12883 1935 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 BAZ2AQ9UIF9 1905 aaKnown RBP12.03□□□□□ -0.48
SYN3-205ENST00000459990 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
SYN3-205ENST00000459990 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 TRIB2Q92519 343 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 TBC1D2Q9BYX2 928 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYN3-205ENST00000459990 MORF4L1Q9UBU8 362 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
SYN3-205ENST00000459990 GCLCP48506 637 aaPredicted RBP12.02□□□□□ -0.49
SYN3-205ENST00000459990 BACE1P56817 501 aa12.02□□□□□ -0.49
SYN3-205ENST00000459990 EVX2Q03828 476 aa12.02□□□□□ -0.49
SYN3-205ENST00000459990 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
SYN3-205ENST00000459990 CCDC158Q5M9N0 1113 aa12.02□□□□□ -0.49
SYN3-205ENST00000459990 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
SYN3-205ENST00000459990 COA7Q96BR5 231 aa12.02□□□□□ -0.49
SYN3-205ENST00000459990 DHX36Q9H2U1 1008 aaKnown RBP12.02□□□□□ -0.49
SYN3-205ENST00000459990 BAG3O95817 575 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 HMGCRP04035 888 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 ASNSP08243 561 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 PLCG2P16885 1265 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 CYP7A1P22680 504 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 HERVK_113P62684 666 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 HNRNPUQ00839 825 aaKnown RBP eCLIP12.01□□□□□ -0.49
SYN3-205ENST00000459990 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
SYN3-205ENST00000459990 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
SYN3-205ENST00000459990 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
SYN3-205ENST00000459990 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 PORCNQ9H237 461 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 AS3MTQ9HBK9 375 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 ZNF236Q9UL36 1845 aa12.01□□□□□ -0.49
SYN3-205ENST00000459990 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
SYN3-205ENST00000459990 IDH1O75874 414 aaKnown RBP12□□□□□ -0.49
SYN3-205ENST00000459990 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
SYN3-205ENST00000459990 PABPC4Q13310 644 aaKnown RBP eCLIP12□□□□□ -0.49
SYN3-205ENST00000459990 Q3C1V9 767 aa12□□□□□ -0.49
SYN3-205ENST00000459990 MAP3K21Q5TCX8 1036 aa12□□□□□ -0.49
SYN3-205ENST00000459990 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
SYN3-205ENST00000459990 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
SYN3-205ENST00000459990 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
SYN3-205ENST00000459990 RBPJLQ9UBG7 517 aa12□□□□□ -0.49
SYN3-205ENST00000459990 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 CNMDO75829 334 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 GH2P01242 217 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 CYP2B6P20813 491 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 IRX3P78415 501 aaPredicted RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 CCL14Q16627 93 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 TATDN1Q6P1N9 297 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 MIER1Q8N108 512 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 USP6NLQ92738 828 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 RIOK1Q9BRS2 568 aaKnown RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 PFASO15067 1338 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 LTBP2Q14767 1821 aa11.99□□□□□ -0.49
SYN3-205ENST00000459990 LAMA2P24043 3122 aaKnown RBP11.99□□□□□ -0.49
SYN3-205ENST00000459990 RPTORQ8N122 1335 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 SHMT1P34896 483 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 PLCD1P51178 756 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 ERVK-9P63128 1117 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 ERVK-24P63145 666 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 FOXP4Q8IVH2 680 aaPredicted RBP11.98□□□□□ -0.49
SYN3-205ENST00000459990 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 C12orf42Q96LP6 360 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 IL1RAPL2Q9NP60 686 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
SYN3-205ENST00000459990 GREB1LQ9C091 1923 aaPredicted RBP11.98□□□□□ -0.49
SYN3-205ENST00000459990 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 EVI5O60447 810 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
SYN3-205ENST00000459990 GPR142Q7Z601 462 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 AACSQ86V21 672 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 GPRC5AQ8NFJ5 357 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 EHD4Q9H223 541 aa11.97□□□□□ -0.49
SYN3-205ENST00000459990 IGSF3O75054 1194 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 CHGBP05060 677 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 VCAM1P19320 739 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 CCND3P30281 292 aaPredicted RBP11.96□□□□□ -0.49
SYN3-205ENST00000459990 USP5P45974 858 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 GABPAQ06546 454 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 CACNB2Q08289 660 aaPredicted RBP11.96□□□□□ -0.49
SYN3-205ENST00000459990 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 MORN1Q5T089 497 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms