RNA–Protein interactions for RNA: ENST00000459931.1

NCDN-206, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 1,041 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-206ENST00000459931 DNAJC18Q9H819 358 aa19.07■□□□□ 0.64
NCDN-206ENST00000459931 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
NCDN-206ENST00000459931 C19orf81C9J6K1 198 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 USP17L10C9JJH3 530 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 IRX3P78415 501 aaPredicted RBP19.06■□□□□ 0.64
NCDN-206ENST00000459931 HABP4Q5JVS0 413 aaKnown RBP19.06■□□□□ 0.64
NCDN-206ENST00000459931 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
NCDN-206ENST00000459931 RPAP2Q8IXW5 612 aaPredicted RBP19.06■□□□□ 0.64
NCDN-206ENST00000459931 CLASRPQ8N2M8 674 aaKnown RBP19.06■□□□□ 0.64
NCDN-206ENST00000459931 SHISA4Q96DD7 197 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 UNC93B1Q9H1C4 597 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 COG6Q9Y2V7 657 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 PTPRFP10586 1907 aa19.06■□□□□ 0.64
NCDN-206ENST00000459931 HMMRO75330 724 aa19.05■□□□□ 0.64
NCDN-206ENST00000459931 INHAP05111 366 aa19.05■□□□□ 0.64
NCDN-206ENST00000459931 TTF1Q15361 905 aaPredicted RBP19.05■□□□□ 0.64
NCDN-206ENST00000459931 C20orf194Q5TEA3 1177 aa19.05■□□□□ 0.64
NCDN-206ENST00000459931 MGAMO43451 1857 aa19.04■□□□□ 0.64
NCDN-206ENST00000459931 TFRCP02786 760 aaKnown RBP19.04■□□□□ 0.64
NCDN-206ENST00000459931 IFIT2P09913 472 aaKnown RBP19.04■□□□□ 0.64
NCDN-206ENST00000459931 SHROOM1Q2M3G4 852 aaPredicted RBP19.04■□□□□ 0.64
NCDN-206ENST00000459931 U2AF1L4Q8WU68 220 aaKnown RBP19.04■□□□□ 0.64
NCDN-206ENST00000459931 KIF1BPQ96EK5 621 aa19.04■□□□□ 0.64
NCDN-206ENST00000459931 SERPINB13Q9UIV8 391 aa19.04■□□□□ 0.64
NCDN-206ENST00000459931 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
NCDN-206ENST00000459931 DDX19BQ9UMR2 479 aa19.04■□□□□ 0.64
NCDN-206ENST00000459931 SGPL1O95470 568 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 GH2P01242 217 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 HOXA7P31268 230 aaPredicted RBP19.03■□□□□ 0.64
NCDN-206ENST00000459931 SLC9C2Q5TAH2 1124 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 TTC6Q86TZ1 520 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 P2RX7Q99572 595 aaKnown RBP19.03■□□□□ 0.64
NCDN-206ENST00000459931 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
NCDN-206ENST00000459931 PCDH10Q9P2E7 1040 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 MAST2Q6P0Q8 1798 aa19.03■□□□□ 0.64
NCDN-206ENST00000459931 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
NCDN-206ENST00000459931 MAGEB6P1A0A0J9YX57 407 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 H0YGN5 161 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 PDE3AQ14432 1141 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 DEFB118Q96PH6 123 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 ZBTB40Q9NUA8 1239 aa19.02■□□□□ 0.64
NCDN-206ENST00000459931 ATAD5Q96QE3 1844 aa19.02■□□□□ 0.63
NCDN-206ENST00000459931 POLR3DP05423 398 aaPredicted RBP19.01■□□□□ 0.63
NCDN-206ENST00000459931 HERVK_113P62684 666 aa19.01■□□□□ 0.63
NCDN-206ENST00000459931 CERKLQ49MI3 558 aaPredicted RBP19.01■□□□□ 0.63
NCDN-206ENST00000459931 TATDN1Q6P1N9 297 aa19.01■□□□□ 0.63
NCDN-206ENST00000459931 USP17L2Q6R6M4 530 aa19.01■□□□□ 0.63
NCDN-206ENST00000459931 CCAR1Q8IX12 1150 aaKnown RBP19.01■□□□□ 0.63
NCDN-206ENST00000459931 DNAJC2Q99543 621 aaKnown RBP19.01■□□□□ 0.63
NCDN-206ENST00000459931 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
NCDN-206ENST00000459931 EHD4Q9H223 541 aa19.01■□□□□ 0.63
NCDN-206ENST00000459931 GOLIM4O00461 696 aa19■□□□□ 0.63
NCDN-206ENST00000459931 RAB11FIP3O75154 756 aa19■□□□□ 0.63
NCDN-206ENST00000459931 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
NCDN-206ENST00000459931 RAB3GAP1Q15042 981 aa19■□□□□ 0.63
NCDN-206ENST00000459931 SIRT2Q8IXJ6 389 aa19■□□□□ 0.63
NCDN-206ENST00000459931 FEZ1Q99689 392 aa19■□□□□ 0.63
NCDN-206ENST00000459931 CABP5Q9NP86 173 aa19■□□□□ 0.63
NCDN-206ENST00000459931 EMILIN3Q9NT22 766 aa19■□□□□ 0.63
NCDN-206ENST00000459931 MORF4L1Q9UBU8 362 aa19■□□□□ 0.63
NCDN-206ENST00000459931 GJD2Q9UKL4 321 aa19■□□□□ 0.63
NCDN-206ENST00000459931 COLQQ9Y215 455 aaPredicted RBP19■□□□□ 0.63
NCDN-206ENST00000459931 PDE6AP16499 860 aa18.99■□□□□ 0.63
NCDN-206ENST00000459931 ZYXQ15942 572 aaKnown RBP18.99■□□□□ 0.63
NCDN-206ENST00000459931 ABCB5Q2M3G0 1257 aa18.99■□□□□ 0.63
NCDN-206ENST00000459931 UBE2Q1Q7Z7E8 422 aa18.99■□□□□ 0.63
NCDN-206ENST00000459931 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
NCDN-206ENST00000459931 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
NCDN-206ENST00000459931 LOC285556D6RIA3 1793 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 SIPA1L1O43166 1804 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 PEX10O60683 326 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 HMGCRP04035 888 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 CAPN2P17655 700 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 PLCD1P51178 756 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.63
NCDN-206ENST00000459931 TXNRD2Q9NNW7 524 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 PAK6Q9NQU5 681 aaPredicted RBP18.98■□□□□ 0.63
NCDN-206ENST00000459931 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 ZNF532Q9HCE3 1301 aa18.98■□□□□ 0.63
NCDN-206ENST00000459931 FOCADQ5VW36 1801 aa18.97■□□□□ 0.63
NCDN-206ENST00000459931 CYP2B6P20813 491 aa18.97■□□□□ 0.63
NCDN-206ENST00000459931 GTF3C2Q8WUA4 911 aaPredicted RBP18.97■□□□□ 0.63
NCDN-206ENST00000459931 PAGR1Q9BTK6 254 aa18.97■□□□□ 0.63
NCDN-206ENST00000459931 MCM9Q9NXL9 1143 aa18.97■□□□□ 0.63
NCDN-206ENST00000459931 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
NCDN-206ENST00000459931 DOCK3Q8IZD9 2030 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 MAPK4P31152 587 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP14P54578 494 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
NCDN-206ENST00000459931 Q3C1V9 767 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms