RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 FOXP4Q8IVH2 680 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-206ENST00000459895 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 SWAP70Q9UH65 585 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
COL18A1-206ENST00000459895 PTPRAP18433 802 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 PPIL2Q13356 520 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 PARP14Q460N5 1801 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 ERO1BQ86YB8 467 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 CLEC10AQ8IUN9 316 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 TBC1D10CQ8IV04 446 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 SLC10A4Q96EP9 437 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 ESYT1Q9BSJ8 1104 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
COL18A1-206ENST00000459895 A0A0G2JMZ2 1700 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 PLIN4Q96Q06 1357 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 GH2P01242 217 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 AKR1B1P15121 316 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 CDK8P49336 464 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 KIF23Q02241 960 aaPredicted RBP15.29■□□□□ 0.04
COL18A1-206ENST00000459895 CTDSPL2Q05D32 466 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 ALX1Q15699 326 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
COL18A1-206ENST00000459895 IRF6O14896 467 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 PRDM1O75626 825 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 FGAP02671 866 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 RASA1P20936 1047 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 HAND2P61296 217 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 PTH1RQ03431 593 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 PPATQ06203 517 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
COL18A1-206ENST00000459895 CERKLQ49MI3 558 aaPredicted RBP15.28■□□□□ 0.04
COL18A1-206ENST00000459895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL18A1-206ENST00000459895 NEDD4P46934 1319 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 ASNSP08243 561 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 GUCY1A2P33402 732 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 DGKZQ13574 1117 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 ANAPC4Q9UJX5 808 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 KCNH4Q9UQ05 1017 aa15.27■□□□□ 0.04
COL18A1-206ENST00000459895 ZSWIM8A7E2V4 1837 aa15.27■□□□□ 0.03
COL18A1-206ENST00000459895 TRIM75PA6NK02 468 aa15.26■□□□□ 0.03
COL18A1-206ENST00000459895 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
COL18A1-206ENST00000459895 MAP2K2P36507 400 aa15.26■□□□□ 0.03
COL18A1-206ENST00000459895 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
COL18A1-206ENST00000459895 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
COL18A1-206ENST00000459895 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
COL18A1-206ENST00000459895 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
COL18A1-206ENST00000459895 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
COL18A1-206ENST00000459895 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 IGF2BP3O00425 579 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL18A1-206ENST00000459895 SREBF2Q12772 1141 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 MTMR2Q13614 643 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 MOGSQ13724 837 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 SEPT2Q15019 361 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 CCL15Q16663 113 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 CASC1Q6TDU7 716 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
COL18A1-206ENST00000459895 A0A0G2JLL6 359 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-206ENST00000459895 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
COL18A1-206ENST00000459895 GTF2A2P52657 109 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 ICA1Q05084 483 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 PDE4BQ07343 736 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 SNAPC2Q13487 334 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 TMEM179Q6ZVK1 233 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 PRRT2Q7Z6L0 340 aaPredicted RBP15.24■□□□□ 0.03
COL18A1-206ENST00000459895 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 STAG1Q8WVM7 1258 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL18A1-206ENST00000459895 GINM1Q9NU53 330 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
COL18A1-206ENST00000459895 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
COL18A1-206ENST00000459895 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
COL18A1-206ENST00000459895 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
COL18A1-206ENST00000459895 ZNF280CQ8ND82 737 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 PTPN18Q99952 460 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 TBC1D2Q9BYX2 928 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 MKNK2Q9HBH9 465 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 AS3MTQ9HBK9 375 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
COL18A1-206ENST00000459895 RLFQ13129 1914 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-206ENST00000459895 ORC4O43929 436 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 CETPP11597 493 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 HMGCS2P54868 508 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 SPP2Q13103 211 aa15.22■□□□□ 0.03
COL18A1-206ENST00000459895 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
COL18A1-206ENST00000459895 IMMTQ16891 758 aaKnown RBP15.22■□□□□ 0.03
COL18A1-206ENST00000459895 FAM47AQ5JRC9 791 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms