RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 FAM196BA6NMK8 535 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 USP17L10C9JJH3 530 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 GOLIM4O00461 696 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-228ENST00000459788 CYP2C8P10632 490 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 IRF5Q13568 498 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
HDLBP-228ENST00000459788 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 ATP8A2Q9NTI2 1148 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 TMOD4Q9NZQ9 345 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
HDLBP-228ENST00000459788 USP14P54578 494 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 HMGCS2P54868 508 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 GPATCH3Q96I76 525 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 C12orf42Q96LP6 360 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 MORF4L1Q9UBU8 362 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 SWAP70Q9UH65 585 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 CEP290O15078 2479 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
HDLBP-228ENST00000459788 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 CTGFP29279 349 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 GRK4P32298 578 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 ADD2P35612 726 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 GABPAQ06546 454 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
HDLBP-228ENST00000459788 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 COA7Q96BR5 231 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
HDLBP-228ENST00000459788 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 ECHDC1Q9NTX5 307 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 SAP30BPQ9UHR5 308 aaKnown RBP12.09□□□□□ -0.47
HDLBP-228ENST00000459788 NDUFB9Q9Y6M9 179 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 BRCA2P51587 3418 aa12.09□□□□□ -0.47
HDLBP-228ENST00000459788 APBB1O00213 710 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 POLR3DP05423 398 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 UBXN2AP68543 259 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 MTMR2Q13614 643 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 BOLA2Q9H3K6 86 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-228ENST00000459788 PLXNB2O15031 1838 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
HDLBP-228ENST00000459788 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
HDLBP-228ENST00000459788 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-228ENST00000459788 SHMT1P34896 483 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 TICAM2Q86XR7 235 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-228ENST00000459788 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
HDLBP-228ENST00000459788 GREB1LQ9C091 1923 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-228ENST00000459788 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
HDLBP-228ENST00000459788 GDF11O95390 407 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 GH2P01242 217 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 GJB1P08034 283 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
HDLBP-228ENST00000459788 JAG1P78504 1218 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 PRKCZQ05513 592 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 SLC4A8Q2Y0W8 1093 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 CCDC84Q86UT8 332 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-228ENST00000459788 LCORLQ8N3X6 602 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 ANKRD13CQ8N6S4 541 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 KBTBD3Q8NAB2 608 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 CCDC17Q96LX7 622 aa12.06□□□□□ -0.48
HDLBP-228ENST00000459788 RLFQ13129 1914 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 ERC2O15083 957 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 ADCY3O60266 1144 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 MAPK4P31152 587 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 FLT3LGP49771 235 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 PLCD1P51178 756 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 HERVK_113P62684 666 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
HDLBP-228ENST00000459788 TMEM179Q6ZVK1 233 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms