RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
NEDD9-205ENST00000459670 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
NEDD9-205ENST00000459670 PDE4BQ07343 736 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 RRP1BQ14684 758 aaKnown RBP12.29□□□□□ -0.44
NEDD9-205ENST00000459670 SLC4A8Q2Y0W8 1093 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 TTC6Q86TZ1 520 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 NSUN7Q8NE18 718 aaKnown RBP12.29□□□□□ -0.44
NEDD9-205ENST00000459670 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
NEDD9-205ENST00000459670 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
NEDD9-205ENST00000459670 SERPINB13Q9UIV8 391 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 RLFQ13129 1914 aa12.29□□□□□ -0.44
NEDD9-205ENST00000459670 CLRN2A0PK11 232 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 NMT2O60551 498 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
NEDD9-205ENST00000459670 SLC3A2P08195 630 aaKnown RBP12.28□□□□□ -0.44
NEDD9-205ENST00000459670 FUT2Q10981 343 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 TROAPQ12815 778 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 CCDC83Q8IWF9 413 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
NEDD9-205ENST00000459670 KLF18A0A0U1RQI7 1052 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 TBC1D12O60347 775 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 DDNO94850 711 aaPredicted RBP12.27□□□□□ -0.45
NEDD9-205ENST00000459670 AKR1B1P15121 316 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 CDC27P30260 824 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 GUCY1A2P33402 732 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 EPS15P42566 896 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 RBM5P52756 815 aaKnown RBP eCLIP12.27□□□□□ -0.45
NEDD9-205ENST00000459670 JAG1P78504 1218 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 TCP10Q12799 353 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.45
NEDD9-205ENST00000459670 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 FAM47AQ5JRC9 791 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
NEDD9-205ENST00000459670 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 BAZ2BQ9UIF8 2168 aaKnown RBP12.27□□□□□ -0.45
NEDD9-205ENST00000459670 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 LOC285556D6RIA3 1793 aa12.27□□□□□ -0.45
NEDD9-205ENST00000459670 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 POTECB2RU33 542 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 IFIT3O14879 490 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 GRIN3BO60391 1043 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 HLA-DOAP06340 250 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 FDPSP14324 419 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 TFAP4Q01664 338 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 PKP1Q13835 747 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 WTAPQ15007 396 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 AMOTL1Q8IY63 956 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 LLPHQ9BRT6 129 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 TMEM39BQ9GZU3 492 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 NCOA5Q9HCD5 579 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 HERC5Q9UII4 1024 aaKnown RBP12.26□□□□□ -0.45
NEDD9-205ENST00000459670 GJA3Q9Y6H8 435 aa12.26□□□□□ -0.45
NEDD9-205ENST00000459670 FAM196BA6NMK8 535 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
NEDD9-205ENST00000459670 JAK2O60674 1132 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 DDAH1O94760 285 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 SNHG28P0DPA3 235 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 SLC35G1Q2M3R5 365 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-205ENST00000459670 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 HACL1Q9UJ83 578 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 STK36Q9NRP7 1315 aa12.25□□□□□ -0.45
NEDD9-205ENST00000459670 A0A0G2JMZ2 1700 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 PHF20L1A8MW92 1017 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 BRD1O95696 1058 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 SIAH1Q8IUQ4 282 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 TMTC2Q8N394 836 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 ZNF287Q9HBT7 754 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
NEDD9-205ENST00000459670 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 MTMR4Q9NYA4 1195 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 TMOD2Q9NZR1 351 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
NEDD9-205ENST00000459670 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
NEDD9-205ENST00000459670 RBBP6Q7Z6E9 1792 aaKnown RBP12.23□□□□□ -0.45
NEDD9-205ENST00000459670 CNTNAP5Q8WYK1 1306 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms