RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 HERC5Q9UII4 1024 aaKnown RBP6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 STX8Q9UNK0 236 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 SBF1O95248 1867 aa6.81□□□□□ -1.32
RNU1-88P-201ENST00000459274 SCN9AQ15858 1988 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 GOLGA6L4A6NEF3 574 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 SPDYE2BA6NHP3 402 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 YDJCA8MPS7 323 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 TCP10L2B9ZVM9 353 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 FZD9O00144 591 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 RAD21O60216 631 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 PFKFB2O60825 505 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 PRDM1O75626 825 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 SPDYE6P0CI01 402 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 GJB2P29033 226 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 CDK8P49336 464 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 CCT2P78371 535 aaKnown RBP6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 ATP2B2Q01814 1243 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 RASSF7Q02833 373 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 TRAF1Q13077 416 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 RTN1Q16799 776 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 KIF4BQ2VIQ3 1234 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 SLC4A8Q2Y0W8 1093 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 SUPT20HL1Q3ZLR7 823 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 MICALL2Q8IY33 904 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 MB21D2Q8IYB1 491 aaPredicted RBP6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 CERS5Q8N5B7 392 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 MTMR14Q8NCE2 650 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 FAM151AQ8WW52 585 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 CSRNP1Q96S65 589 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 LZTS2Q9BRK4 669 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZKSCAN3Q9BRR0 538 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 MXD3Q9BW11 206 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 LRRC2Q9BYS8 371 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 EHD4Q9H223 541 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 ARHGEF10LQ9HCE6 1279 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 EPB41L4AQ9HCS5 686 aaPredicted RBP6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZNF70Q9UC06 446 aaPredicted RBP6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZBTB12Q9Y330 459 aaPredicted RBP6.8□□□□□ -1.32
RNU1-88P-201ENST00000459274 TNKSO95271 1327 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZC3H4Q9UPT8 1303 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 VPS37CA5D8V6 355 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 DDX11L8A8MPP1 907 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 NFKBIEO00221 500 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 DDAH1O94760 285 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TTLL1O95922 423 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TOP1P11387 765 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 PDIA3P30101 505 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 GMPSP49915 693 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 IKQ13123 557 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 CUL4AQ13619 759 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 ME3Q16798 604 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 ABCB5Q2M3G0 1257 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 MCTP1Q6DN14 999 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 APOBEC3HQ6NTF7 200 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 SGMS1Q86VZ5 419 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 MICU3Q86XE3 530 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TBC1D10CQ8IV04 446 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 SULF1Q8IWU6 871 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 FANCBQ8NB91 859 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 CCDC12Q8WUD4 166 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 PRMT6Q96LA8 375 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 LARP6Q9BRS8 491 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZSCAN16Q9H4T2 348 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TCP11L1Q9NUJ3 509 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 SEC63Q9UGP8 760 aaKnown RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 TPCN1Q9ULQ1 816 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 CTDP1Q9Y5B0 961 aaPredicted RBP6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 PPP2R3BQ9Y5P8 575 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 MYH4Q9Y623 1939 aa6.79□□□□□ -1.32
RNU1-88P-201ENST00000459274 NEDD4P46934 1319 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 CYP2D7A0A087X1C5 515 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 CLRN2A0PK11 232 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 SH2B2O14492 632 aaPredicted RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 SOCS7O14512 581 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 STX6O43752 255 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 FGRP09769 529 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 PLCD1P51178 756 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 RHBDL3P58872 404 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 GRIK5Q16478 980 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 SKOR2Q2VWA4 1001 aaPredicted RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 SPDYE2Q495Y8 402 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 FAM47AQ5JRC9 791 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 APOA5Q6Q788 366 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 TMEM179Q6ZVK1 233 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 USP48Q86UV5 1035 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 PNMA8AQ86V59 439 aaPredicted RBP6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZNF654Q8IZM8 581 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 NECAB1Q8N987 351 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 NEDD1Q8NHV4 660 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 IGDCC4Q8TDY8 1250 aa6.78□□□□□ -1.32
RNU1-88P-201ENST00000459274 ZNF384Q8TF68 577 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms