RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-227ENST00000458564 GDF15Q99988 308 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 OGDHLQ9ULD0 1010 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
HDLBP-227ENST00000458564 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-227ENST00000458564 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TRIM32Q13049 653 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
HDLBP-227ENST00000458564 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 P2RX7Q99572 595 aaKnown RBP12.79□□□□□ -0.36
HDLBP-227ENST00000458564 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 DBNDD2Q9BQY9 259 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
HDLBP-227ENST00000458564 CDK5RAP2Q96SN8 1893 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
HDLBP-227ENST00000458564 MAPK4P31152 587 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 MAPKAPK5Q8IW41 473 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-227ENST00000458564 USP6NLQ92738 828 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
HDLBP-227ENST00000458564 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
HDLBP-227ENST00000458564 BCAR3O75815 825 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 CYP2B6P20813 491 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 ERVK-9P63128 1117 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 ERVK-24P63145 666 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 SHROOM1Q2M3G4 852 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-227ENST00000458564 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-227ENST00000458564 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-227ENST00000458564 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 C11orf49Q9H6J7 331 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
HDLBP-227ENST00000458564 PFASO15067 1338 aa12.77□□□□□ -0.37
HDLBP-227ENST00000458564 GDF11O95390 407 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 COL6A1P12109 1028 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 ZKSCAN1P17029 563 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-227ENST00000458564 ZAP70P43403 619 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 MORN1Q5T089 497 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 APBA2Q99767 749 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 EHD4Q9H223 541 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 PORCNQ9H237 461 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 PIH1D3Q9NQM4 214 aaKnown RBP12.76□□□□□ -0.37
HDLBP-227ENST00000458564 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
HDLBP-227ENST00000458564 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
HDLBP-227ENST00000458564 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 PEX10O60683 326 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
HDLBP-227ENST00000458564 RGS2P41220 211 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-227ENST00000458564 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-227ENST00000458564 Q3C1V9 767 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-227ENST00000458564 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
HDLBP-227ENST00000458564 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
HDLBP-227ENST00000458564 GH2P01242 217 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 CYP7A1P22680 504 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-227ENST00000458564 LHX8Q68G74 356 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 PLEKHH3Q7Z736 793 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
HDLBP-227ENST00000458564 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
HDLBP-227ENST00000458564 SERPINB13Q9UIV8 391 aa12.74□□□□□ -0.37
HDLBP-227ENST00000458564 CUL9Q8IWT3 2517 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms