RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 IFRD2Q12894 506 aaPredicted RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 IFT74Q96LB3 600 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 BUB1O43683 1085 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 CALCRLQ16602 461 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 SDCCAG8Q86SQ7 713 aaPredicted RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 OAS2P29728 719 aaKnown RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 TACO1Q9BSH4 297 aaKnown RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 MKRN1Q9UHC7 482 aaKnown RBP21.86■■□□□ 1.09
SNX27-204ENST00000458013 CFBP00751 764 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 CEP120Q8N960 986 aa21.86■■□□□ 1.09
SNX27-204ENST00000458013 VPS37BQ9H9H4 285 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 VGLL3A8MV65 326 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 A1BGP04217 495 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 SARNPP82979 210 aaKnown RBP21.85■■□□□ 1.09
SNX27-204ENST00000458013 HHATQ5VTY9 493 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 CCDC105Q8IYK2 499 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 LSM14BQ9BX40 385 aaKnown RBP21.85■■□□□ 1.09
SNX27-204ENST00000458013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.85■■□□□ 1.09
SNX27-204ENST00000458013 ERO1AQ96HE7 468 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 AFG3L2Q9Y4W6 797 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 ZBTB7BO15156 539 aaPredicted RBP21.85■■□□□ 1.09
SNX27-204ENST00000458013 HERC4Q5GLZ8 1057 aaPredicted RBP21.85■■□□□ 1.09
SNX27-204ENST00000458013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.85■■□□□ 1.09
SNX27-204ENST00000458013 CNBD1Q8NA66 436 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 UHMK1Q8TAS1 419 aaKnown RBP21.85■■□□□ 1.09
SNX27-204ENST00000458013 MIPOL1Q8TD10 442 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 PNMA6EA0A0J9YXQ4 647 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 SEPT6Q14141 434 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 POSTNQ15063 836 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 TPH2Q8IWU9 490 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 NACA2Q9H009 215 aa21.85■■□□□ 1.09
SNX27-204ENST00000458013 ZAP70P43403 619 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 PUM3Q15397 648 aaKnown RBP21.84■■□□□ 1.09
SNX27-204ENST00000458013 CABP7Q86V35 215 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 ABCB4P21439 1286 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 ATP5DP30049 168 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 GBP1P32455 592 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 CLNS1AP54105 237 aaKnown RBP21.84■■□□□ 1.09
SNX27-204ENST00000458013 NPHP3Q7Z494 1330 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 RRAGAQ7L523 313 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 SEPT10Q9P0V9 454 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 ARID4AP29374 1257 aaPredicted RBP21.84■■□□□ 1.09
SNX27-204ENST00000458013 IRX3P78415 501 aaPredicted RBP21.84■■□□□ 1.09
SNX27-204ENST00000458013 DCUN1D2Q6PH85 259 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 PNMA8AQ86V59 439 aaPredicted RBP21.84■■□□□ 1.09
SNX27-204ENST00000458013 MCUR1Q96AQ8 359 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 DESI2Q9BSY9 194 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 SERTAD1Q9UHV2 236 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 NPATQ14207 1427 aa21.84■■□□□ 1.09
SNX27-204ENST00000458013 ADCY7P51828 1080 aa21.83■■□□□ 1.09
SNX27-204ENST00000458013 IFT20Q8IY31 132 aa21.83■■□□□ 1.09
SNX27-204ENST00000458013 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
SNX27-204ENST00000458013 ZNF532Q9HCE3 1301 aa21.83■■□□□ 1.09
SNX27-204ENST00000458013 GOLGA6BA6NDN3 693 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 CSPG5O95196 566 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 CYP2J2P51589 502 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 RIMS2Q9UQ26 1411 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 CD19P15391 556 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 SND1Q7KZF4 910 aaKnown RBP eCLIP21.83■■□□□ 1.08
SNX27-204ENST00000458013 TTC6Q86TZ1 520 aa21.83■■□□□ 1.08
SNX27-204ENST00000458013 CARD14Q9BXL6 1004 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 TACC3Q9Y6A5 838 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 KRT15P19012 456 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 INPP5BP32019 993 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 B4DLN1 442 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 POLD1P28340 1107 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 MRPL12P52815 198 aaKnown RBP21.82■■□□□ 1.08
SNX27-204ENST00000458013 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 LRWD1Q9UFC0 647 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 EXOC3O60645 756 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 DIXDC1Q155Q3 683 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 LONRF2Q1L5Z9 754 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 TBC1D10BQ4KMP7 808 aaPredicted RBP21.82■■□□□ 1.08
SNX27-204ENST00000458013 TBC1D31Q96DN5 1066 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
SNX27-204ENST00000458013 EYA3Q99504 573 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 USP19O94966 1318 aa21.82■■□□□ 1.08
SNX27-204ENST00000458013 FAM102BQ5T8I3 360 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 RILPQ96NA2 401 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 TTF2Q9UNY4 1162 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 HSPA2P54652 639 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 U2AF1L4Q8WU68 220 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 PCDH11XQ9BZA7 1347 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 PCDH11YQ9BZA8 1340 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 A0A1W2PP64 1363 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 ARFGAP2Q8N6H7 521 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 PRPF6O94906 941 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 VPS41P49754 854 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 KLHL30Q0D2K2 578 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 RILPL1Q5EBL4 403 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 INTS4Q96HW7 963 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 ACTN4O43707 911 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 SPOUT1Q5T280 376 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 NSMFQ6X4W1 530 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 CHAMP1Q96JM3 812 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 ANGEL1Q9UNK9 670 aaKnown RBP21.81■■□□□ 1.08
SNX27-204ENST00000458013 ABL1P00519 1130 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 SLC8A3P57103 927 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 VSIG1Q86XK7 387 aa21.81■■□□□ 1.08
SNX27-204ENST00000458013 GGA1Q9UJY5 639 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms