RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ADGRA1Q86SQ6 560 aa19.21■□□□□ 0.67
CHCHD3-204ENST00000457942 HERC5Q9UII4 1024 aaKnown RBP19.21■□□□□ 0.67
CHCHD3-204ENST00000457942 CYP7A1P22680 504 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 TRIM32Q13049 653 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 NECAB2Q7Z6G3 386 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 CRACR2BQ8N4Y2 399 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 PXYLP1Q8TE99 480 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 COA7Q96BR5 231 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 DHX36Q9H2U1 1008 aaKnown RBP19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 COG6Q9Y2V7 657 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 FLT1P17948 1338 aa19.2■□□□□ 0.66
CHCHD3-204ENST00000457942 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 HMMRO75330 724 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 IRF5Q13568 498 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 CRISPLD2Q9H0B8 497 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 PI4KBQ9UBF8 816 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 NDUFB9Q9Y6M9 179 aa19.19■□□□□ 0.66
CHCHD3-204ENST00000457942 MYH1P12882 1939 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 CAP2P40123 477 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 PPP4CP60510 307 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 SPP2Q13103 211 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 MAGEB6Q8N7X4 407 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 MIGA1Q8NAN2 632 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 GDF15Q99988 308 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 AS3MTQ9HBK9 375 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 SAP30BPQ9UHR5 308 aaKnown RBP19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 PNMA3Q9UL41 463 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 SLC45A1Q9Y2W3 748 aa19.18■□□□□ 0.66
CHCHD3-204ENST00000457942 LOC285556D6RIA3 1793 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 IGSF3O75054 1194 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 DYNLL1P63167 89 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 MAP3K12Q12852 859 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 ZNF280CQ8ND82 737 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 TBC1D2Q9BYX2 928 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 RCAN3Q9UKA8 241 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 PALD1Q9ULE6 856 aa19.17■□□□□ 0.66
CHCHD3-204ENST00000457942 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 MAGEA10P43363 369 aaPredicted RBP19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 USP5P45974 858 aa19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 MNX1P50219 401 aaPredicted RBP19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 HMGCS2P54868 508 aa19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 CLASRPQ8N2M8 674 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-204ENST00000457942 HMGCRP04035 888 aa19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 IFIT2P09913 472 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 PABPC4Q13310 644 aaKnown RBP eCLIP19.15■□□□□ 0.663e-7■■■■□ 20
CHCHD3-204ENST00000457942 RRP1BQ14684 758 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 CERS3Q8IU89 383 aa19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 RPAP2Q8IXW5 612 aaPredicted RBP19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 PROCA1Q8NCQ7 364 aaPredicted RBP19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 KIF1BPQ96EK5 621 aa19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 ANTXR1Q9H6X2 564 aa19.15■□□□□ 0.66
CHCHD3-204ENST00000457942 GDF11O95390 407 aa19.14■□□□□ 0.65
CHCHD3-204ENST00000457942 ASNSP08243 561 aa19.14■□□□□ 0.65
CHCHD3-204ENST00000457942 FAM110CQ1W6H9 321 aa19.14■□□□□ 0.65
CHCHD3-204ENST00000457942 DNAJC2Q99543 621 aaKnown RBP19.14■□□□□ 0.65
CHCHD3-204ENST00000457942 C11orf49Q9H6J7 331 aa19.14■□□□□ 0.65
CHCHD3-204ENST00000457942 PEX10O60683 326 aa19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 MTMR2Q13614 643 aa19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 TTF1Q15361 905 aaPredicted RBP19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 FOXP4Q8IVH2 680 aaPredicted RBP19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 TDHQ8IZJ6 230 aa19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 UBE2OQ9C0C9 1292 aaKnown RBP19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 NBPF3Q9H094 633 aa19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 HMX1Q9NP08 348 aaPredicted RBP19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 TMOD4Q9NZQ9 345 aa19.13■□□□□ 0.65
CHCHD3-204ENST00000457942 DOCK3Q8IZD9 2030 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 NAV1Q8NEY1 1877 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 BMP8BP34820 402 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 TRIB2Q92519 343 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 DNAJC18Q9H819 358 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
CHCHD3-204ENST00000457942 PLXNB2O15031 1838 aa19.11■□□□□ 0.65
CHCHD3-204ENST00000457942 IRX3P78415 501 aaPredicted RBP19.11■□□□□ 0.65
CHCHD3-204ENST00000457942 ANKLE1Q8NAG6 615 aa19.11■□□□□ 0.65
CHCHD3-204ENST00000457942 ZBTB21Q9ULJ3 1066 aa19.11■□□□□ 0.65
CHCHD3-204ENST00000457942 STXBP5LQ9Y2K9 1186 aa19.11■□□□□ 0.65
CHCHD3-204ENST00000457942 PFASO15067 1338 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 RPTORQ8N122 1335 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 GOLIM4O00461 696 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 CYP2B6P20813 491 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 TMED8Q6PL24 325 aaPredicted RBP19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 ASCC2Q9H1I8 757 aaPredicted RBP19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 MTMR10Q9NXD2 777 aa19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 LAMA2P24043 3122 aaKnown RBP19.1■□□□□ 0.65
CHCHD3-204ENST00000457942 MAGEB6P1A0A0J9YX57 407 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 PRKAR2AP13861 404 aaKnown RBP19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 GCLCP48506 637 aaPredicted RBP19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 BACE1P56817 501 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 SHROOM1Q2M3G4 852 aaPredicted RBP19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 SLC9C2Q5TAH2 1124 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 SIRT2Q8IXJ6 389 aa19.09■□□□□ 0.65
CHCHD3-204ENST00000457942 FAM161BQ96MY7 647 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms