RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ANTXR2P58335 489 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 CXCL9Q07325 125 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 ME3Q16798 604 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 PPP4R3BQ5MIZ7 849 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 CDC42EP5Q6NZY7 148 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 DPF2Q92785 391 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 SWAP70Q9UH65 585 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 NID2Q14112 1375 aa10.47□□□□□ -0.73
CDC42EP3-204ENST00000457889 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 MYO1BO43795 1136 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 RAD17O75943 681 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 CDKL5O76039 1030 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 DLGAP5Q15398 846 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 CFAP100Q494V2 611 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 TMEM67Q5HYA8 995 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 CPLX2Q6PUV4 134 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 SYNE3Q6ZMZ3 975 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 NOL8Q76FK4 1167 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 MAPKAPK5Q8IW41 473 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 IGDCC4Q8TDY8 1250 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 TCEANC2Q96MN5 208 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 SYT17Q9BSW7 474 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 MXD3Q9BW11 206 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 OSBPL5Q9H0X9 879 aaPredicted RBP10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 TOMM22Q9NS69 142 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.73
CDC42EP3-204ENST00000457889 ATRNL1Q5VV63 1379 aa10.46□□□□□ -0.74
CDC42EP3-204ENST00000457889 ECM29Q5VYK3 1845 aa10.46□□□□□ -0.74
CDC42EP3-204ENST00000457889 MYH1P12882 1939 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 PLIN4Q96Q06 1357 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 CALM1P0DP23 149 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 CALM2P0DP24 149 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 CALM3P0DP25 149 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZNF280AP59817 542 aaPredicted RBP10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 WTAPQ15007 396 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 RRP12Q5JTH9 1297 aaKnown RBP10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 LY9Q9HBG7 655 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 TCP11L1Q9NUJ3 509 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 SERPINB13Q9UIV8 391 aa10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 DICER1Q9UPY3 1922 aaKnown RBP10.45□□□□□ -0.74
CDC42EP3-204ENST00000457889 WDR33Q9C0J8 1336 aaKnown RBP10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZC3H4Q9UPT8 1303 aaKnown RBP10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 TSPY2A6NKD2 308 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 RANBP6O60518 1105 aaKnown RBP10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 DDAH1O94760 285 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 GABPAQ06546 454 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 APOBRQ0VD83 1088 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 COL9A3Q14050 684 aaPredicted RBP10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 RAB3GAP1Q15042 981 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 FAM83AQ86UY5 434 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 DGKHQ86XP1 1220 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 CCDC83Q8IWF9 413 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZNF444Q8N0Y2 327 aaPredicted RBP10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 LRRC2Q9BYS8 371 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 PI4KBQ9UBF8 816 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 SLC12A7Q9Y666 1083 aa10.44□□□□□ -0.74
CDC42EP3-204ENST00000457889 TNKSO95271 1327 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CYP2D7A0A087X1C5 515 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CPLX1O14810 134 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZBTB43O43298 467 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 LARGE1O95461 756 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CYP2D6P10635 497 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 RASSF7Q02833 373 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 TNFAIP1Q13829 316 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 SEC23AQ15436 765 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 IFIT1BQ5T764 474 aaKnown RBP10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CLEC17AQ6ZS10 378 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CHST3Q7LGC8 479 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CATIPQ7Z7H3 387 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 FOXP4Q8IVH2 680 aaPredicted RBP10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 GPC2Q8N158 579 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 SPRYD3Q8NCJ5 442 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 SMARCC2Q8TAQ2 1214 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZBED3Q96IU2 234 aaPredicted RBP10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 CCDC17Q96LX7 622 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 MAP3K14Q99558 947 aa10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 DDX4Q9NQI0 724 aaKnown RBP10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
CDC42EP3-204ENST00000457889 TSPY3P0CV98 308 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms