RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CIAPIN1Q6FI81 312 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 ARHGAP27Q6ZUM4 889 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.32□□□□□ -0.76
RIF1-208ENST00000457745 NACAP1Q9BZK3 213 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 OSBPL5Q9H0X9 879 aaPredicted RBP10.32□□□□□ -0.76
RIF1-208ENST00000457745 IL17RBQ9NRM6 502 aa10.32□□□□□ -0.76
RIF1-208ENST00000457745 ARPP21Q9UBL0 812 aaPredicted RBP10.32□□□□□ -0.76
RIF1-208ENST00000457745 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 ORC4O43929 436 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 PFKFB2O60825 505 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 IGSF3O75054 1194 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 BAG3O95817 575 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 CDC27P30260 824 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 MCM5P33992 734 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 HDLBPQ00341 1268 aaKnown RBP10.31□□□□□ -0.76
RIF1-208ENST00000457745 TCP10Q12799 353 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 NBPF9Q3BBW0 867 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 RCSD1Q6JBY9 416 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 MFSD6Q6ZSS7 791 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 GTF3C6Q969F1 213 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 VPS33BQ9H267 617 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 TOMM22Q9NS69 142 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
RIF1-208ENST00000457745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 SHMT1P34896 483 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 CDK8P49336 464 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76
RIF1-208ENST00000457745 SLC35G1Q2M3R5 365 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 FOXD4L5Q5VV16 416 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 TMED8Q6PL24 325 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 DLK2Q6UY11 383 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 C16orf86Q6ZW13 317 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 SAMD7Q7Z3H4 446 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 RALYLQ86SE5 291 aaKnown RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 CCDC144CPQ8IYA2 1237 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 TRPM4Q8TD43 1214 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 MRIQ9BWK5 157 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 ZNF70Q9UC06 446 aaPredicted RBP10.3□□□□□ -0.76
RIF1-208ENST00000457745 GJA3Q9Y6H8 435 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 TNKSO95271 1327 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
RIF1-208ENST00000457745 GOLGB1Q14789 3259 aaKnown RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 ATRNL1Q5VV63 1379 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 GOLGA8BA8MQT2 603 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 TCP10L2B9ZVM9 353 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 IFIT3O14879 490 aaKnown RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 AKR1B1P15121 316 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 MCM2P49736 904 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 FOSBP53539 338 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 ZNF280AP59817 542 aaPredicted RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 APOA5Q6Q788 366 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 MICALL2Q8IY33 904 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 CHMP4CQ96CF2 233 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 SHISA4Q96DD7 197 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 NOL10Q9BSC4 688 aaKnown RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 IDI2Q9BXS1 227 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 RTN4Q9NQC3 1192 aaKnown RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 GJB4Q9NTQ9 266 aa10.29□□□□□ -0.76
RIF1-208ENST00000457745 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.29□□□□□ -0.76
RIF1-208ENST00000457745 WNT10BO00744 389 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 RANBP6O60518 1105 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 HMGB1P09429 215 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 PLCG2P16885 1265 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 GJB2P29033 226 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 HIRAP54198 1017 aaPredicted RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 TFAP4Q01664 338 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 RAB3GAP1Q15042 981 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 TBC1D10BQ4KMP7 808 aaPredicted RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 CMTR1Q8N1G2 835 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 INTS4Q96HW7 963 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 AIFM3Q96NN9 605 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 KRT23Q9C075 422 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 CHMP5Q9NZZ3 219 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 ANGEL1Q9UNK9 670 aaKnown RBP10.28□□□□□ -0.76
RIF1-208ENST00000457745 MYO3BQ8WXR4 1341 aa10.28□□□□□ -0.76
RIF1-208ENST00000457745 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 IGKV6D-41A0A0C4DH26 115 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 PTPDC1A2A3K4 754 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 DDNO94850 711 aaPredicted RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 LMNB1P20700 586 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 GUCY1A2P33402 732 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.77
RIF1-208ENST00000457745 EPS15P42566 896 aa10.27□□□□□ -0.77
RIF1-208ENST00000457745 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms