RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 CTDSPL2Q05D32 466 aa24.41■■□□□ 1.5
FAM3A-217ENST00000457212 RNF41Q9H4P4 317 aaPredicted RBP24.41■■□□□ 1.5
FAM3A-217ENST00000457212 RBM8AQ9Y5S9 174 aaKnown RBP24.41■■□□□ 1.5
FAM3A-217ENST00000457212 ATAD5Q96QE3 1844 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 EPB41L2O43491 1005 aaKnown RBP24.4■■□□□ 1.5
FAM3A-217ENST00000457212 FGRP09769 529 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 HAND2P61296 217 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 ABCB5Q2M3G0 1257 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 PAXIP1Q6ZW49 1069 aaPredicted RBP24.4■■□□□ 1.5
FAM3A-217ENST00000457212 CABP5Q9NP86 173 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 ZBTB21Q9ULJ3 1066 aa24.4■■□□□ 1.5
FAM3A-217ENST00000457212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
FAM3A-217ENST00000457212 ORC4O43929 436 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 GDF11O95390 407 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 SLC10A3P09131 477 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 NT5C2P49902 561 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 PPATQ06203 517 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 AKNAD1Q5T1N1 836 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 RASAL3Q86YV0 1011 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 ZNF444Q8N0Y2 327 aaPredicted RBP24.39■■□□□ 1.49
FAM3A-217ENST00000457212 STK11IPQ8N1F8 1099 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 STAG1Q8WVM7 1258 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 TBC1D2Q9BYX2 928 aa24.39■■□□□ 1.49
FAM3A-217ENST00000457212 ZBTB48P10074 688 aaPredicted RBP24.38■■□□□ 1.49
FAM3A-217ENST00000457212 PTPRAP18433 802 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 RASA1P20936 1047 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 SPRYD7Q5W111 196 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 MFSD6Q6ZSS7 791 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 OPTNQ96CV9 577 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 WNK4Q96J92 1243 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 CAPNS2Q96L46 248 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 NBPF3Q9H094 633 aa24.38■■□□□ 1.49
FAM3A-217ENST00000457212 FAM155AB1AL88 458 aaPredicted RBP24.37■■□□□ 1.49
FAM3A-217ENST00000457212 GH2P01242 217 aa24.37■■□□□ 1.49
FAM3A-217ENST00000457212 PPIL2Q13356 520 aa24.37■■□□□ 1.49
FAM3A-217ENST00000457212 CYP4F22Q6NT55 531 aa24.37■■□□□ 1.49
FAM3A-217ENST00000457212 TMEM179Q6ZVK1 233 aa24.37■■□□□ 1.49
FAM3A-217ENST00000457212 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.37■■□□□ 1.49
FAM3A-217ENST00000457212 USP17L5A8MUK1 530 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 MPHOSPH10O00566 681 aaKnown RBP24.36■■□□□ 1.49
FAM3A-217ENST00000457212 PRDM1O75626 825 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 CYP21A2P08686 494 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 AKR1B1P15121 316 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 JAG1P78504 1218 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 NOGQ13253 232 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 NECTIN1Q15223 517 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 TBC1D10CQ8IV04 446 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 OTUD5Q96G74 571 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 AS3MTQ9HBK9 375 aa24.36■■□□□ 1.49
FAM3A-217ENST00000457212 RNF20Q5VTR2 975 aa24.35■■□□□ 1.49
FAM3A-217ENST00000457212 ZHX2Q9Y6X8 837 aa24.35■■□□□ 1.49
FAM3A-217ENST00000457212 WDR33Q9C0J8 1336 aaKnown RBP24.35■■□□□ 1.49
FAM3A-217ENST00000457212 VEGFBP49765 207 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 CNKSR2Q8WXI2 1034 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 WDR18Q9BV38 432 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 CNNM2Q9H8M5 875 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 TOMM22Q9NS69 142 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 TACC3Q9Y6A5 838 aa24.34■■□□□ 1.49
FAM3A-217ENST00000457212 TSPY3P0CV98 308 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 TSPY8P0CW00 308 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 GJA5P36382 358 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 SHROOM1Q2M3G4 852 aaPredicted RBP24.33■■□□□ 1.49
FAM3A-217ENST00000457212 CREB3L3Q68CJ9 461 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 NEDD1Q8NHV4 660 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 KRT23Q9C075 422 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 INCENPQ9NQS7 918 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 AFG3L2Q9Y4W6 797 aa24.33■■□□□ 1.49
FAM3A-217ENST00000457212 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.48
FAM3A-217ENST00000457212 PLIN4Q96Q06 1357 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 GREB1LQ9C091 1923 aaPredicted RBP24.32■■□□□ 1.48
FAM3A-217ENST00000457212 CXCL11O14625 94 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 SLC27A2O14975 620 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 RANBP6O60518 1105 aaKnown RBP24.32■■□□□ 1.48
FAM3A-217ENST00000457212 GUCY1A2P33402 732 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 TFAP4Q01664 338 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 GRM1Q13255 1194 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 SEPT2Q15019 361 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 RAB3GAP1Q15042 981 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 C8orf34Q49A92 452 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 ZNF280CQ8ND82 737 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 ESR2Q92731 530 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 KANSL2Q9H9L4 492 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 KCNH4Q9UQ05 1017 aa24.32■■□□□ 1.48
FAM3A-217ENST00000457212 TSPY2A6NKD2 308 aa24.31■■□□□ 1.48
FAM3A-217ENST00000457212 IRF6O14896 467 aa24.31■■□□□ 1.48
FAM3A-217ENST00000457212 MAP2K2P36507 400 aa24.31■■□□□ 1.48
FAM3A-217ENST00000457212 GTF2A2P52657 109 aa24.31■■□□□ 1.48
FAM3A-217ENST00000457212 TRDNQ13061 729 aa24.31■■□□□ 1.48
FAM3A-217ENST00000457212 RRP12Q5JTH9 1297 aaKnown RBP24.31■■□□□ 1.48
FAM3A-217ENST00000457212 REM2Q8IYK8 340 aaPredicted RBP24.31■■□□□ 1.48
FAM3A-217ENST00000457212 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.31■■□□□ 1.48
FAM3A-217ENST00000457212 MANSC4A6NHS7 340 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-217ENST00000457212 ZKSCAN1P17029 563 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-217ENST00000457212 HSPA4P34932 840 aa24.3■■□□□ 1.48
FAM3A-217ENST00000457212 SNAPC2Q13487 334 aa24.3■■□□□ 1.48
FAM3A-217ENST00000457212 PPP4R3BQ5MIZ7 849 aa24.3■■□□□ 1.48
FAM3A-217ENST00000457212 CCDC84Q86UT8 332 aaPredicted RBP24.3■■□□□ 1.48
FAM3A-217ENST00000457212 DNAJC5GQ8N7S2 189 aa24.3■■□□□ 1.48
FAM3A-217ENST00000457212 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
FAM3A-217ENST00000457212 USP26Q9BXU7 913 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms