RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TTC41PQ6P2S7 1318 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 ERC2O15083 957 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 CHGBP05060 677 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 CAP1Q01518 475 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 ARHGAP39Q9C0H5 1083 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 MGAMO43451 1857 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 PLCD1P51178 756 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 JAG1P78504 1218 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 MTMR2Q13614 643 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 AAMPQ13685 434 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 TREML2Q5T2D2 321 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 KBTBD3Q8NAB2 608 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 DDRGK1Q96HY6 314 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 WDR18Q9BV38 432 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 DCP1AQ9NPI6 582 aaPredicted RBP19.55■□□□□ 0.72
CPSF6-203ENST00000456847 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
CPSF6-203ENST00000456847 GH2P01242 217 aa19.54■□□□□ 0.72
CPSF6-203ENST00000456847 PABPC4Q13310 644 aaKnown RBP eCLIP19.54■□□□□ 0.722e-6■□□□□ 9.6
CPSF6-203ENST00000456847 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
CPSF6-203ENST00000456847 CERKLQ49MI3 558 aaPredicted RBP19.54■□□□□ 0.72
CPSF6-203ENST00000456847 AMOTL1Q8IY63 956 aa19.54■□□□□ 0.72
CPSF6-203ENST00000456847 PRKAB2O43741 272 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 TATDN1Q6P1N9 297 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
CPSF6-203ENST00000456847 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 MX1P20591 662 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 CABP5Q9NP86 173 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 SLC4A4Q9Y6R1 1079 aa19.53■□□□□ 0.72
CPSF6-203ENST00000456847 USP17L10C9JJH3 530 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 GLRX3O76003 335 aaKnown RBP19.52■□□□□ 0.72
CPSF6-203ENST00000456847 FMNL1O95466 1100 aaPredicted RBP19.52■□□□□ 0.72
CPSF6-203ENST00000456847 CYP2D6P10635 497 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 OSBPP22059 807 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 PSMC4P43686 418 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 BACE1P56817 501 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 RAB3GAP1Q15042 981 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 SH3D19Q5HYK7 790 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 FEZ1Q99689 392 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 PUS7LQ9H0K6 701 aaKnown RBP19.52■□□□□ 0.72
CPSF6-203ENST00000456847 PTCH2Q9Y6C5 1203 aa19.52■□□□□ 0.72
CPSF6-203ENST00000456847 GNRH1P01148 92 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 BCRP11274 1271 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 SHMT1P34896 483 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 LRRFIP1Q32MZ4 808 aaKnown RBP19.51■□□□□ 0.71
CPSF6-203ENST00000456847 C19orf81C9J6K1 198 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 ZFYP08048 801 aaPredicted RBP19.51■□□□□ 0.71
CPSF6-203ENST00000456847 EVX2Q03828 476 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 APPBP2Q92624 585 aa19.51■□□□□ 0.71
CPSF6-203ENST00000456847 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
CPSF6-203ENST00000456847 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
CPSF6-203ENST00000456847 RNF113AO15541 343 aaKnown RBP19.5■□□□□ 0.71
CPSF6-203ENST00000456847 FCGRTP55899 365 aa19.5■□□□□ 0.71
CPSF6-203ENST00000456847 MLLT1Q03111 559 aaPredicted RBP19.5■□□□□ 0.71
CPSF6-203ENST00000456847 FSD1Q9BTV5 496 aa19.5■□□□□ 0.71
CPSF6-203ENST00000456847 HOXD10P28358 340 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 PRMT2P55345 433 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 IRX3P78415 501 aaPredicted RBP19.49■□□□□ 0.71
CPSF6-203ENST00000456847 GABPAQ06546 454 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
CPSF6-203ENST00000456847 SLC9C1Q4G0N8 1177 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 TRIM47Q96LD4 638 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
CPSF6-203ENST00000456847 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 CTGFP29279 349 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 RGS19P49795 217 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 USP17L2Q6R6M4 530 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 ANKRD13CQ8N6S4 541 aa19.49■□□□□ 0.71
CPSF6-203ENST00000456847 ASCC2Q9H1I8 757 aaPredicted RBP19.49■□□□□ 0.71
CPSF6-203ENST00000456847 SLC44A5Q8NCS7 719 aa19.48■□□□□ 0.71
CPSF6-203ENST00000456847 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
CPSF6-203ENST00000456847 MYPNQ86TC9 1320 aa19.48■□□□□ 0.71
CPSF6-203ENST00000456847 CYP2D7A0A087X1C5 515 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 USP17L12C9JPN9 530 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 USP17L21D6R901 530 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 OSBP2Q969R2 916 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 SRRDQ9UH36 339 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 GCLCP48506 637 aaPredicted RBP19.47■□□□□ 0.71
CPSF6-203ENST00000456847 NBPF11Q86T75 865 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 RAET1EQ8TD07 263 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 ARMC5Q96C12 935 aa19.47■□□□□ 0.71
CPSF6-203ENST00000456847 STRBPQ96SI9 672 aaKnown RBP19.47■□□□□ 0.71
CPSF6-203ENST00000456847 ARPP21Q9UBL0 812 aaPredicted RBP19.47■□□□□ 0.71
CPSF6-203ENST00000456847 SALL3Q9BXA9 1300 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 GPAA1O43292 621 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 SEPT2Q15019 361 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 FAM110CQ1W6H9 321 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 B4GALNT3Q6L9W6 998 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 LNPKQ9C0E8 428 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 TAOK2Q9UL54 1235 aa19.46■□□□□ 0.71
CPSF6-203ENST00000456847 RBBP6Q7Z6E9 1792 aaKnown RBP19.46■□□□□ 0.71
CPSF6-203ENST00000456847 M0R2C6 588 aa19.45■□□□□ 0.7
CPSF6-203ENST00000456847 USP14P54578 494 aa19.45■□□□□ 0.7
CPSF6-203ENST00000456847 EMILIN3Q9NT22 766 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms