RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
USP39-208ENST00000455732 RNF113AO15541 343 aaKnown RBP20.88■□□□□ 0.93
USP39-208ENST00000455732 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 SDR42E1Q8WUS8 393 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 TBC1D2Q9BYX2 928 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
USP39-208ENST00000455732 EFCC1Q9HA90 598 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 ATP8A2Q9NTI2 1148 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 GINM1Q9NU53 330 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 SERPINB13Q9UIV8 391 aa20.88■□□□□ 0.93
USP39-208ENST00000455732 CENPFP49454 3210 aa20.87■□□□□ 0.93
USP39-208ENST00000455732 JAG1P78504 1218 aa20.87■□□□□ 0.93
USP39-208ENST00000455732 B4GALNT3Q6L9W6 998 aa20.87■□□□□ 0.93
USP39-208ENST00000455732 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
USP39-208ENST00000455732 USP17L5A8MUK1 530 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 SLC4A8Q2Y0W8 1093 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 TATDN1Q6P1N9 297 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 PTPN22Q9Y2R2 807 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 SLC45A1Q9Y2W3 748 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 MYH8P13535 1937 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 PDE4DIPQ5VU43 2346 aa20.86■□□□□ 0.93
USP39-208ENST00000455732 PRKAB2O43741 272 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 POLR3DP05423 398 aaPredicted RBP20.85■□□□□ 0.93
USP39-208ENST00000455732 ASNSP08243 561 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 PLCD1P51178 756 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 LACTBP83111 547 aaPredicted RBP20.85■□□□□ 0.93
USP39-208ENST00000455732 GABPAQ06546 454 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 SPP2Q13103 211 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 GADL1Q6ZQY3 521 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 TICAM2Q86XR7 235 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 PARK7Q99497 189 aaKnown RBP20.85■□□□□ 0.93
USP39-208ENST00000455732 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 OSBPL3Q9H4L5 887 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 CPA4Q9UI42 421 aa20.85■□□□□ 0.93
USP39-208ENST00000455732 CYP2C8P10632 490 aa20.84■□□□□ 0.93
USP39-208ENST00000455732 SHROOM1Q2M3G4 852 aaPredicted RBP20.84■□□□□ 0.93
USP39-208ENST00000455732 EVI5LQ96CN4 794 aa20.84■□□□□ 0.93
USP39-208ENST00000455732 STRBPQ96SI9 672 aaKnown RBP20.84■□□□□ 0.93
USP39-208ENST00000455732 WDR18Q9BV38 432 aa20.84■□□□□ 0.93
USP39-208ENST00000455732 DOCK3Q8IZD9 2030 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 GDF11O95390 407 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 BCRP11274 1271 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 ARHGEF6Q15052 776 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 SH3D19Q5HYK7 790 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 PROCA1Q8NCQ7 364 aaPredicted RBP20.83■□□□□ 0.93
USP39-208ENST00000455732 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 ARHGAP39Q9C0H5 1083 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 AS3MTQ9HBK9 375 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 AGTPBP1Q9UPW5 1226 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 SLC4A4Q9Y6R1 1079 aa20.83■□□□□ 0.93
USP39-208ENST00000455732 KIAA0100Q14667 2235 aaKnown RBP20.83■□□□□ 0.93
USP39-208ENST00000455732 CTGFP29279 349 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 SHMT1P34896 483 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 ZMYM1Q5SVZ6 1142 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 TREML2Q5T2D2 321 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 GIMAP6Q6P9H5 292 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
USP39-208ENST00000455732 M0R2C6 588 aa20.81■□□□□ 0.92
USP39-208ENST00000455732 GPAA1O43292 621 aa20.81■□□□□ 0.92
USP39-208ENST00000455732 GNAT2P19087 354 aa20.81■□□□□ 0.92
USP39-208ENST00000455732 HMGCS2P54868 508 aa20.81■□□□□ 0.92
USP39-208ENST00000455732 KIF22Q14807 665 aa20.81■□□□□ 0.92
USP39-208ENST00000455732 RBBP6Q7Z6E9 1792 aaKnown RBP20.81■□□□□ 0.92
USP39-208ENST00000455732 SLC34A2O95436 690 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 CYP2D6P10635 497 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 BACE1P56817 501 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 EVX2Q03828 476 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 C12orf60Q5U649 245 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 AMOTL1Q8IY63 956 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
USP39-208ENST00000455732 SWAP70Q9UH65 585 aa20.8■□□□□ 0.92
USP39-208ENST00000455732 GSG1L2A8MUP6 293 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 USP17L12C9JPN9 530 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 USP17L21D6R901 530 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 GNRH1P01148 92 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 GH2P01242 217 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 MTMR2Q13614 643 aa20.79■□□□□ 0.92
USP39-208ENST00000455732 CERKLQ49MI3 558 aaPredicted RBP20.79■□□□□ 0.92
USP39-208ENST00000455732 PSMC4P43686 418 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 SBK1Q52WX2 424 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 CTR9Q6PD62 1173 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 ARMC5Q96C12 935 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 TRIM47Q96LD4 638 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 PTCH2Q9Y6C5 1203 aa20.78■□□□□ 0.92
USP39-208ENST00000455732 C19orf81C9J6K1 198 aa20.77■□□□□ 0.92
USP39-208ENST00000455732 USP17L10C9JJH3 530 aa20.77■□□□□ 0.92
USP39-208ENST00000455732 ABCB5Q2M3G0 1257 aa20.77■□□□□ 0.92
USP39-208ENST00000455732 SEC62Q99442 399 aaKnown RBP20.77■□□□□ 0.92
USP39-208ENST00000455732 EPB41L4AQ9HCS5 686 aaPredicted RBP20.77■□□□□ 0.92
USP39-208ENST00000455732 PNMA3Q9UL41 463 aa20.77■□□□□ 0.92
USP39-208ENST00000455732 ROBO3Q96MS0 1386 aa20.76■□□□□ 0.91
USP39-208ENST00000455732 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
USP39-208ENST00000455732 C16orf86Q6ZW13 317 aa20.76■□□□□ 0.91
USP39-208ENST00000455732 SMCR8Q8TEV9 937 aaPredicted RBP20.76■□□□□ 0.91
USP39-208ENST00000455732 DYNLL2Q96FJ2 89 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms