RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 NTRK3Q16288 839 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 DACT2Q5SW24 774 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 C12orf60Q5U649 245 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 CCDC125Q86Z20 511 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 ENAHQ8N8S7 591 aaPredicted RBP10.8□□□□□ -0.68
VSIG4-204ENST00000455586 PGBD1Q96JS3 809 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 FLT1P17948 1338 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
VSIG4-204ENST00000455586 RAD17O75943 681 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 LIG1P18858 919 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 RBM5P52756 815 aaKnown RBP eCLIP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 KIAA2012Q0VF49 1180 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 NFIAQ12857 509 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 RTN1Q16799 776 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 WASF1Q92558 559 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 USP28Q96RU2 1077 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 ALG1Q9BT22 464 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 GAKO14976 1311 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 IFNAR1P17181 557 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 CEBPZQ03701 1054 aaKnown RBP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 TRIM29Q14134 588 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 PPP2R5BQ15173 497 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 SEC23AQ15436 765 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 IQCA1Q86XH1 822 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 CERS3Q8IU89 383 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 ZFPM1Q8IX07 1006 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 ZNF654Q8IZM8 581 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 RNF214Q8ND24 703 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 ZSCAN10Q96SZ4 725 aaPredicted RBP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 USP40Q9NVE5 1235 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
VSIG4-204ENST00000455586 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
VSIG4-204ENST00000455586 COL4A5P29400 1685 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 hCG_1642624A0A1W2PR95 340 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 TSPY2A6NKD2 308 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 ORC4O43929 436 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 FMNL1O95466 1100 aaPredicted RBP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 POLD1P28340 1107 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 CRKP46108 304 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 NT5C2P49902 561 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 TFAP4Q01664 338 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 KIF23Q02241 960 aaPredicted RBP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 MAP3K11Q16584 847 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 SBK1Q52WX2 424 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 CCDC93Q567U6 631 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 CDC42EP5Q6NZY7 148 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 TRIM22Q8IYM9 498 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 FUCA2Q9BTY2 467 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
VSIG4-204ENST00000455586 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 RTEL1Q9NZ71 1219 aa10.78□□□□□ -0.68
VSIG4-204ENST00000455586 NAV1Q8NEY1 1877 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 WDHD1O75717 1129 aaPredicted RBP10.77□□□□□ -0.68
VSIG4-204ENST00000455586 YEATS4O95619 227 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 CCDC192P0DO97 292 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 GUCY1A2P33402 732 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 TCP10Q12799 353 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 STRIP1Q5VSL9 837 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 MYSM1Q5VVJ2 828 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 RASGRP2Q7LDG7 609 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 TNMDQ9H2S6 317 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 MKNK2Q9HBH9 465 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 IL17RBQ9NRM6 502 aa10.77□□□□□ -0.68
VSIG4-204ENST00000455586 PDE4BQ07343 736 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 UVSSAQ2YD98 709 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 IFIT1BQ5T764 474 aaKnown RBP10.77□□□□□ -0.69
VSIG4-204ENST00000455586 KRT40Q6A162 431 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 FANCBQ8NB91 859 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 UBE2Q2Q8WVN8 375 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 TEKT1Q969V4 418 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 PDLIM2Q96JY6 352 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 PIM2Q9P1W9 311 aa10.77□□□□□ -0.69
VSIG4-204ENST00000455586 FAM196BA6NMK8 535 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 NR1I2O75469 434 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 ME1P48163 572 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 RBM43Q6ZSC3 357 aaKnown RBP10.76□□□□□ -0.69
VSIG4-204ENST00000455586 SLF2Q8IX21 1173 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 NLGN2Q8NFZ4 835 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 BCS1LQ9Y276 419 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
VSIG4-204ENST00000455586 PSMD14O00487 310 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms