RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 SMC1BQ8NDV3 1235 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 JAKMIP1Q96N16 626 aaKnown RBP12.71□□□□□ -0.37
SYPL1-202ENST00000455385 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
SYPL1-202ENST00000455385 GDF11O95390 407 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 CAP2P40123 477 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 KRT23Q9C075 422 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 PPP1R12BO60237 982 aaPredicted RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 NF2P35240 595 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 ANTXR2P58335 489 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 KRT32Q14532 448 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.387e-7■■□□□ 12.7
SYPL1-202ENST00000455385 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 CNNM2Q9H8M5 875 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 IL17RBQ9NRM6 502 aa12.7□□□□□ -0.38
SYPL1-202ENST00000455385 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
SYPL1-202ENST00000455385 NMT2O60551 498 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
SYPL1-202ENST00000455385 TRDNQ13061 729 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 ESR2Q92731 530 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 WRNIP1Q96S55 665 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 ZKSCAN3Q9BRR0 538 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
SYPL1-202ENST00000455385 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 MYH8P13535 1937 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 GH2P01242 217 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
SYPL1-202ENST00000455385 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 CCDC17Q96LX7 622 aa12.69□□□□□ -0.38
SYPL1-202ENST00000455385 GPHNQ9NQX3 736 aaPredicted RBP12.69□□□□□ -0.38
SYPL1-202ENST00000455385 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 PSMA5P28066 241 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 CCDC84Q86UT8 332 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 CLEC10AQ8IUN9 316 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 LRRC2Q9BYS8 371 aa12.68□□□□□ -0.38
SYPL1-202ENST00000455385 GBA2Q9HCG7 927 aaPredicted RBP12.68□□□□□ -0.38
SYPL1-202ENST00000455385 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 SEPT2Q15019 361 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 PRC1O43663 620 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 RPS6KB1P23443 525 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 MCM5P33992 734 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 IREB2P48200 963 aaKnown RBP12.67□□□□□ -0.38
SYPL1-202ENST00000455385 FSTL1Q12841 308 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 VGLL4Q14135 290 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 TCP11L1Q9NUJ3 509 aa12.67□□□□□ -0.38
SYPL1-202ENST00000455385 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
SYPL1-202ENST00000455385 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 RCSD1Q6JBY9 416 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 ARMC9Q7Z3E5 817 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 C2orf69Q8N8R5 385 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
SYPL1-202ENST00000455385 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 SNCAIPQ9Y6H5 919 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 PAPPA2Q9BXP8 1791 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 GREB1LQ9C091 1923 aaPredicted RBP12.66□□□□□ -0.38
SYPL1-202ENST00000455385 NOVP48745 357 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 NEK4P51957 841 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 SEC23AQ15436 765 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 NOL9Q5SY16 702 aaKnown RBP12.66□□□□□ -0.38
SYPL1-202ENST00000455385 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
SYPL1-202ENST00000455385 MTMR4Q9NYA4 1195 aa12.66□□□□□ -0.38
SYPL1-202ENST00000455385 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
SYPL1-202ENST00000455385 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
SYPL1-202ENST00000455385 ASNSP08243 561 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms