RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PPP4R3BQ5MIZ7 849 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 TMEM179Q6ZVK1 233 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 CYP21A2P08686 494 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 SLURP2P0DP57 97 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 PTPRAP18433 802 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 RASA1P20936 1047 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 HAND2P61296 217 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 RRP1BQ14684 758 aaKnown RBP16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 ZBTB21Q9ULJ3 1066 aa16.95■□□□□ 0.3
HMGXB4-204ENST00000455359 USP17L5A8MUK1 530 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 GH2P01242 217 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 SLC10A3P09131 477 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 ZKSCAN1P17029 563 aaPredicted RBP16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 TRDNQ13061 729 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 PPIL2Q13356 520 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 ESR2Q92731 530 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 KCNB2Q92953 911 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 KRT23Q9C075 422 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 NBPF3Q9H094 633 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 AS3MTQ9HBK9 375 aa16.94■□□□□ 0.3
HMGXB4-204ENST00000455359 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 CXCL11O14625 94 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 SLC27A2O14975 620 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 GDF11O95390 407 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 AKR1B1P15121 316 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 MCCP23508 829 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 HSPA4P34932 840 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 KRT32Q14532 448 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 SPRYD7Q5W111 196 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 TBC1D10CQ8IV04 446 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 NEDD1Q8NHV4 660 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
HMGXB4-204ENST00000455359 TRPM7Q96QT4 1865 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 PRDM1O75626 825 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 NOGQ13253 232 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 WNK4Q96J92 1243 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
HMGXB4-204ENST00000455359 MYH1P12882 1939 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TFAP4Q01664 338 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 CCDC178Q5BJE1 867 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 STK11IPQ8N1F8 1099 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 ZNF280CQ8ND82 737 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 OTUD5Q96G74 571 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 CAPNS2Q96L46 248 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TOMM22Q9NS69 142 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 TCP11L1Q9NUJ3 509 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 AFG3L2Q9Y4W6 797 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
HMGXB4-204ENST00000455359 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 E7EWF7 191 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 GUCY1A2P33402 732 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 MAP2K2P36507 400 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 GTF2A2P52657 109 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 INHBEP58166 350 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 JAG1P78504 1218 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 SNAPC2Q13487 334 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 SEPT2Q15019 361 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
HMGXB4-204ENST00000455359 SIPA1L1O43166 1804 aa16.89■□□□□ 0.3
HMGXB4-204ENST00000455359 MANSC4A6NHS7 340 aaPredicted RBP16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 IRF6O14896 467 aa16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 RALYLQ86SE5 291 aaKnown RBP16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 IQCA1Q86XH1 822 aa16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 ARHGEF10LQ9HCE6 1279 aa16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 NYAP2Q9P242 653 aa16.89■□□□□ 0.29
HMGXB4-204ENST00000455359 NEDD4P46934 1319 aa16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 HMGB1P09429 215 aaKnown RBP16.88■□□□□ 0.29
HMGXB4-204ENST00000455359 CETPP11597 493 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms