RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 KANSL2Q9H9L4 492 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
ATXN3-205ENST00000454964 MANSC4A6NHS7 340 aaPredicted RBP11.24□□□□□ -0.61
ATXN3-205ENST00000454964 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 UBE2Q2LH0YL09 131 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 CXCL11O14625 94 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 ORC4O43929 436 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 FGRP09769 529 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 CDK8P49336 464 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 PLCD1P51178 756 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 GTF2A2P52657 109 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 USP14P54578 494 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
ATXN3-205ENST00000454964 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 ESR2Q92731 530 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 TTC14Q96N46 770 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 MTA3Q9BTC8 594 aa11.24□□□□□ -0.61
ATXN3-205ENST00000454964 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
ATXN3-205ENST00000454964 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
ATXN3-205ENST00000454964 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATXN3-205ENST00000454964 PPIL2Q13356 520 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 SART3Q15020 963 aaKnown RBP11.23□□□□□ -0.61
ATXN3-205ENST00000454964 SLFNL1Q499Z3 407 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
ATXN3-205ENST00000454964 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
ATXN3-205ENST00000454964 TMTC2Q8N394 836 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 ARHGEF10LQ9HCE6 1279 aa11.23□□□□□ -0.61
ATXN3-205ENST00000454964 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 CA12O43570 354 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 CETPP11597 493 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 PTPRAP18433 802 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-205ENST00000454964 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 PRKG1Q13976 671 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 VGLL4Q14135 290 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 DOCK1Q14185 1865 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
ATXN3-205ENST00000454964 ZNF280CQ8ND82 737 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 BEGAINQ9BUH8 593 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 SCAF8Q9UPN6 1271 aaKnown RBP11.22□□□□□ -0.61
ATXN3-205ENST00000454964 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
ATXN3-205ENST00000454964 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 ERICH2A1L162 156 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 TSPY2A6NKD2 308 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 USP17L10C9JJH3 530 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 SLC10A3P09131 477 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 PSMA5P28066 241 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 SHMT1P34896 483 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 VPS53Q5VIR6 699 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 ZKSCAN4Q969J2 545 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 OPTNQ96CV9 577 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 CAPNS2Q96L46 248 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 EPB41L4AQ9HCS5 686 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-205ENST00000454964 TOMM22Q9NS69 142 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
ATXN3-205ENST00000454964 LAMA4Q16363 1823 aa11.21□□□□□ -0.62
ATXN3-205ENST00000454964 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
ATXN3-205ENST00000454964 CHGBP05060 677 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 TM4SF4P48230 202 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
ATXN3-205ENST00000454964 LPAR1Q92633 364 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
ATXN3-205ENST00000454964 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 ZBTB21Q9ULJ3 1066 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 SLC45A1Q9Y2W3 748 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 RBM8AQ9Y5S9 174 aaKnown RBP11.2□□□□□ -0.62
ATXN3-205ENST00000454964 SNCAIPQ9Y6H5 919 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
ATXN3-205ENST00000454964 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-205ENST00000454964 TTLL1O95922 423 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 GH2P01242 217 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 RASA1P20936 1047 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 INPP5BP32019 993 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 ANAPC15P60006 121 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 TFAP4Q01664 338 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms