RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 NECAB2Q7Z6G3 386 aa9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 CERS3Q8IU89 383 aa9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 WDR18Q9BV38 432 aa9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 TSHZ2Q9NRE2 1034 aa9.85□□□□□ -0.83
NIF3L1-209ENST00000454952 C19orf81C9J6K1 198 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 HMGCS2P54868 508 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 CCDC158Q5M9N0 1113 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 NAA16Q6N069 864 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 TMED8Q6PL24 325 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 FOXP4Q8IVH2 680 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 SOCS4Q8WXH5 440 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 ASCC2Q9H1I8 757 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 PRO3102Q9H379 93 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 GPR108Q9NPR9 543 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 MORF4L1Q9UBU8 362 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 FOCADQ5VW36 1801 aa9.84□□□□□ -0.83
NIF3L1-209ENST00000454952 RPTORQ8N122 1335 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 CCER2I3L3R5 266 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 STK25O00506 426 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 HLA-DOAP06340 250 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 HOXA7P31268 230 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 BACE1P56817 501 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 PPP4CP60510 307 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 PDE3AQ14432 1141 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 TTC39AQ5SRH9 613 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 TBC1D9Q6ZT07 1266 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 CCAR1Q8IX12 1150 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 CRACR2BQ8N4Y2 399 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 ZNF384Q8TF68 577 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 CDK5RAP2Q96SN8 1893 aa9.83□□□□□ -0.84
NIF3L1-209ENST00000454952 FAM196BA6NMK8 535 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 XRCC5P13010 732 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 TRIM27P14373 513 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 MAPK4P31152 587 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 MCAMP43121 646 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 OS9Q13438 667 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 MTMR2Q13614 643 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 GPRC5AQ8NFJ5 357 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 SH3RF3Q8TEJ3 882 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 PAWRQ96IZ0 340 aaKnown RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 ZNF512BQ96KM6 892 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 NUDT12Q9BQG2 462 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.82□□□□□ -0.84
NIF3L1-209ENST00000454952 USP17L10C9JJH3 530 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 BMP8BP34820 402 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 TNNI3KQ59H18 835 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 PI16Q6UXB8 463 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 METTL16Q86W50 562 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 FRAT1Q92837 279 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 C11orf49Q9H6J7 331 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 AATFQ9NY61 560 aaKnown RBP eCLIP9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 FPGT-TNNI3KV9GXZ4 949 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 ALPK3Q96L96 1907 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 FLT1P17948 1338 aa9.81□□□□□ -0.84
NIF3L1-209ENST00000454952 MYH1P12882 1939 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 PLXNB2O15031 1838 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 SIPA1L1O43166 1804 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 DDX60LQ5H9U9 1706 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 PNMA6EA0A0J9YXQ4 647 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 SLURP2P0DP57 97 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 ZKSCAN1P17029 563 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 RGS2P41220 211 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 HERVK_113P62684 666 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 CCNA1P78396 465 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 MAPKAPK5Q8IW41 473 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 TGFBRAP1Q8WUH2 860 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 ZBTB21Q9ULJ3 1066 aa9.8□□□□□ -0.84
NIF3L1-209ENST00000454952 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 USP14P54578 494 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 MAP3K21Q5TCX8 1036 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 C7orf61Q8IZ16 206 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 SSH3Q8TE77 659 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 P2RX7Q99572 595 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 FEZ1Q99689 392 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 SNRKQ9NRH2 765 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 MYO5AQ9Y4I1 1855 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-209ENST00000454952 CYP2E1P05181 493 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 CYP2B6P20813 491 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 CYP7A1P22680 504 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 USP5P45974 858 aa9.78□□□□□ -0.84
NIF3L1-209ENST00000454952 ERVK-9P63128 1117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms