RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 SUZ12Q15022 739 aaKnown RBP7.58□□□□□ -1.2
CDH19-202ENST00000454642 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 C2orf27AQ580R0 203 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 PPM1JQ5JR12 505 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 EDARADDQ8WWZ3 215 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 WDR18Q9BV38 432 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 FAM86C1Q9NVL1 165 aa7.58□□□□□ -1.2
CDH19-202ENST00000454642 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 DNAJC6O75061 913 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 AOC2O75106 756 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 AMPD1P23109 780 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 TKFCQ3LXA3 575 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 ZC3H12AQ5D1E8 599 aaKnown RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 KCNK4Q9NYG8 393 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 ZMYM5Q9UJ78 669 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 COL4A3BPQ9Y5P4 624 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 SYNJ1O43426 1573 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 TM4SF5O14894 197 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 SLFN14P0C7P3 912 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 GYS2P54840 703 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 FOXD4L6Q3SYB3 417 aaPredicted RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 FOXD4L3Q6VB84 417 aaPredicted RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 THAP3Q8WTV1 239 aaPredicted RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
CDH19-202ENST00000454642 SPC25Q9HBM1 224 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 PTCH2Q9Y6C5 1203 aa7.57□□□□□ -1.2
CDH19-202ENST00000454642 RAG1P15918 1043 aa7.56□□□□□ -1.2
CDH19-202ENST00000454642 CD68P34810 354 aaPredicted RBP7.56□□□□□ -1.2
CDH19-202ENST00000454642 ANAPC15P60006 121 aa7.56□□□□□ -1.2
CDH19-202ENST00000454642 HNRNPUQ00839 825 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDH19-202ENST00000454642 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
CDH19-202ENST00000454642 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
CDH19-202ENST00000454642 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
CDH19-202ENST00000454642 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 MAGI1Q96QZ7 1491 aaPredicted RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 PPP1R12AO14974 1030 aaPredicted RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 RAB11FIP3O75154 756 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 C21orf62-AS1Q17RA5 79 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 TMEM201Q5SNT2 666 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 CDCP2Q5VXM1 449 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 C16orf86Q6ZW13 317 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 TAB3Q8N5C8 712 aaPredicted RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 ST13P5Q8NFI4 369 aaPredicted RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 BTBD6Q96KE9 485 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 NOP58Q9Y2X3 529 aaKnown RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 PCDHGC5Q9Y5F6 944 aa7.55□□□□□ -1.2
CDH19-202ENST00000454642 POLA1P09884 1462 aaPredicted RBP7.55□□□□□ -1.2
CDH19-202ENST00000454642 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 ASMTLO95671 621 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 GNPTABQ3T906 1256 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 KIAA0907Q7Z7F0 614 aaPredicted RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 DPH2Q9BQC3 489 aaPredicted RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 PHAXQ9H814 394 aaKnown RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 PCDH12Q9NPG4 1184 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 NCAPHQ15003 741 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 FEZ1Q99689 392 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 CWC22Q9HCG8 908 aaKnown RBP7.54□□□□□ -1.2
CDH19-202ENST00000454642 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
CDH19-202ENST00000454642 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 SUSD5O60279 629 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 NID1P14543 1247 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 ID3Q02535 119 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
CDH19-202ENST00000454642 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 ZNF385CQ66K41 422 aaPredicted RBP7.53□□□□□ -1.2
CDH19-202ENST00000454642 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 ADAM30Q9UKF2 790 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 CD2APQ9Y5K6 639 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
CDH19-202ENST00000454642 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
CDH19-202ENST00000454642 FAM153BP0C7A2 387 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 ERVK-24P63145 666 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 RING1Q06587 406 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 TRAPPC3LQ5T215 181 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.21
CDH19-202ENST00000454642 TMEM87BQ96K49 555 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 SPATA9Q9BWV2 254 aa7.52□□□□□ -1.21
CDH19-202ENST00000454642 FBRSQ9HAH7 460 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms